SMTL ID : 5nw8.1

Crystal Structure of the Protein-Kinase A catalytic subunit from Criteculus Griseus in complex with compounds RKp032 and Fasudil

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 8 residues within 4Å: Chain A: V.16, F.19, L.20, F.101, L.153, E.156, K.293, Y.307 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.16, A:F.19, A:F.19, A:L.20, A:F.101, A:Y.307 Hydrogen bonds: A:E.156, A:K.293 Water bridges: A:K.293

1 x M77: 5-(1,4-DIAZEPAN-1-SULFONYL)ISOQUINOLINE(Non-covalent)

M77.2: 14 residues within 4Å: Chain A: G.51, V.58, A.71, M.121, E.122, Y.123, V.124, E.128, E.171, N.172, L.174, T.184, D.185, F.328 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.58, A:A.71, A:L.174, A:T.184, A:F.328 Hydrogen bonds: A:V.124 Water bridges: A:D.185 Salt bridges: A:D.185

1 x RIP: beta-D-ribopyranose(Post Translational Modification)

RIP.3: 2 residues within 4Å: Chain B: S.14, N.16 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mueller, J.M. et al., Conceptional Design of Self-Assembling Bisubstrate-like Inhibitors of Protein Kinase A Resulting in a Boronic Acid Glutamate Linkage. Acs Omega (2019)

Release Date

2018-05-30

Peptides

cAMP-dependent protein kinase catalytic subunit alpha: A
UPF0418 protein FAM164A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

cAMP-dependent protein kinase catalytic subunit alpha

UPF0418 protein FAM164A

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