SMTL ID : 5nyh.1

Crystal Structure of Hsp90-alpha N-Domain in complex with Indazole derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x 9EK: ~{N}-methyl-~{N}-(4-morpholin-4-ylphenyl)-6-oxidanyl-3-pyrrolidin-1-ylcarbonyl-2~{H}-indazole-5-carboxamide(Non-covalent)

9EK.1: 14 residues within 4Å: Chain A: L.41, N.44, S.45, D.47, A.48, D.86, I.89, G.90, M.91, L.100, G.128, F.131, T.177, V.179 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:N.44, A:L.100, A:L.100, A:F.131 Hydrogen bonds: A:N.44, A:G.90 Water bridges: A:G.88, A:G.128, A:F.131, A:T.177 9EK.2: 14 residues within 4Å: Chain B: L.41, N.44, S.45, D.47, A.48, D.86, I.89, G.90, M.91, L.100, G.128, F.131, T.177, V.179 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:N.44, B:L.100, B:L.100, B:F.131 Hydrogen bonds: B:N.44, B:G.90 Water bridges: B:G.88, B:G.128, B:F.131, B:T.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schuetz, D.A. et al., Ligand Desolvation Steers On-Rate and Impacts Drug Residence Time of Heat Shock Protein 90 (Hsp90) Inhibitors. J. Med. Chem. (2018)

Release Date

2018-04-18

Peptides

Heat shock protein HSP 90-alpha: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Heat shock protein HSP 90-alpha

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