SMTL ID : 5nz0.1

Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with linezolid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.82 Å

Oligo State

homo-dimer

Ligands

2 x ZLD: N-{[(5S)-3-(3-fluoro-4-morpholin-4-ylphenyl)-2-oxo-1,3-oxazolidin-5-yl]methyl}acetamide(Non-covalent)

ZLD.1: 14 residues within 4Å: Chain A: M.106, W.107, G.110, I.111, F.114, M.146, W.149, Y.152, T.153, V.156, N.180, N.183, L.187, W.211 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.114, A:W.149, A:V.156, A:W.211 Hydrogen bonds: A:Y.152 Halogen bonds: A:N.183 ZLD.3: 14 residues within 4Å: Chain B: M.106, W.107, G.110, I.111, F.114, M.146, W.149, Y.152, T.153, V.156, N.180, N.183, L.187, W.211 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:F.114, B:W.149, B:V.156, B:W.211 Halogen bonds: B:N.183

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: S.50, V.51 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.51, A:R.62 EDO.4: 2 residues within 4Å: Chain B: S.50, V.51 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:V.51, B:R.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nikiforov, P.O. et al., The antibiotics linezolid and sutezolid are ligands for Mycobacterium tuberculosis EthR. To Be Published

Release Date

2018-05-30

Peptides

HTH-type transcriptional regulator EthR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HTH-type transcriptional regulator EthR

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