SMTL ID : 5oa6.1

Crystal structure of ScGas2 in complex with compound 12

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x 9PT: (2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-3,5-bis(oxidanyl)-6-[4-(3-quinolin-1-ium-1-ylpropyl)-1,2,3-triazol-1-yl]oxan-4-yl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-oxane-3,4,5-triol(Non-covalent)

9PT.1: 17 residues within 4Å: Chain A: Q.60, Q.62, Y.107, D.132, S.134, E.135, P.136, S.139, I.140, N.141, R.142, N.175, V.177, Y.244, E.275, Y.307, Y.316 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:Y.244, A:Y.244, A:Y.307 Hydrogen bonds: A:Y.107, A:S.134, A:S.134, A:P.136, A:S.139, A:I.140, A:R.142, A:N.175, A:Y.307 Water bridges: A:Q.62, A:Q.62, A:I.140, A:N.141, A:R.142, A:R.142, A:R.142

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: S.163, S.164, H.206 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.163 Salt bridges: A:H.206

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 4 residues within 4Å: Chain A: S.114, H.115, D.116, F.165 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.115, A:D.116 EDO.4: 4 residues within 4Å: Chain A: R.227, E.366, P.368, H.369 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.227, A:R.227, A:H.369, A:H.369 EDO.5: 4 residues within 4Å: Chain A: S.425, D.426, G.437, E.438 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.438 EDO.6: 3 residues within 4Å: Chain A: A.461, D.463, H.465 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.465

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Delso, I. et al., Inhibitors against Fungal Cell Wall Remodeling Enzymes. ChemMedChem (2018)

Release Date

2018-05-02

Peptides

1,3-beta-glucanosyltransferase GAS2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

1,3-beta-glucanosyltransferase GAS2

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