SMTL ID : 5oep.2 (1 other biounit)

Mycobacterium tuberculosis DprE1 in complex with inhibitor TCA481

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 33 residues within 4Å: Chain A: W.32, I.68, A.69, R.70, G.71, L.72, G.73, R.74, S.75, Y.76, N.79, A.80, M.90, A.110, P.132, G.133, T.134, V.137, T.138, G.140, G.141, A.144, C.145, I.147, H.148, N.194, G.195, G.198, I.199, I.200, Y.431, A.433 Ligands: 9T2.2 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:W.32, A:R.74, A:Y.76, A:T.134 Hydrogen bonds: A:G.71, A:L.72, A:G.73, A:R.74, A:S.75, A:N.79, A:G.133, A:T.138, A:H.148, A:H.148, A:N.194, A:I.200, A:I.200 Water bridges: A:G.140, A:G.140 pi-Cation interactions: A:K.434

1 x 9T2: ethyl ~{N}-[2-(1,3-benzothiazol-2-ylcarbonylamino)-5-fluoranyl-thiophen-3-yl]carbonylcarbamate(Non-covalent)

9T2.2: 14 residues within 4Å: Chain A: Y.76, H.148, G.149, K.150, S.244, Y.330, Q.352, V.381, K.383, F.385, N.401, C.403, K.434 Ligands: FAD.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.381 Hydrogen bonds: A:S.244, A:K.434

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, R. et al., Determinants of the Inhibition of DprE1 and CYP2C9 by Antitubercular Thiophenes. Angew. Chem. Int. Ed. Engl. (2017)

Release Date

2018-05-16

Peptides

Decaprenylphosphoryl-beta-D-ribose oxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Decaprenylphosphoryl-beta-D-ribose oxidase

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