SMTL ID : 5okz.1 (3 other biounits)

Crystal Strucrure of the Mpp6 Exosome complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-mer

Ligands

1 x TAM: TRIS(HYDROXYETHYL)AMINOMETHANE(Non-covalent)

TAM.1: 1 residues within 4Å: Chain B: E.121 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.121

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain C: Q.134 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain I: R.72, D.84 Ligand excluded by PLIP

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain D: G.142, A.143, E.148 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Falk, S. et al., Mpp6 Incorporation in the Nuclear Exosome Contributes to RNA Channeling through the Mtr4 Helicase. Cell Rep (2017)

Release Date

2017-08-30

Peptides

Exosome complex component CSL4: A
Exosome complex component RRP45: B
Exosome complex component SKI6: C
Exosome complex component RRP43: D
Exosome complex component RRP46: E
Exosome complex component RRP42: F
Exosome complex component MTR3: G
Exosome complex component RRP40: H
Exosome complex component RRP4: I
M-phase phosphoprotein 6 homolog: J

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
m

B
e

C
f

D
g

E
h

F
i

G
j

H
k

I
l

J
n

Exosome complex component CSL4

Exosome complex component RRP45

Exosome complex component SKI6

Exosome complex component RRP43

Exosome complex component RRP46

Exosome complex component RRP42

Exosome complex component MTR3

Exosome complex component RRP40

Exosome complex component RRP4

M-phase phosphoprotein 6 homolog

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