SMTL ID : 5ona.2 (1 other biounit)

Drosophila Bag-of-marbles CBM peptide bound to human CAF40-CNOT1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-1-mer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.214, K.216, V.217 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.217 Salt bridges: A:R.214, A:K.216 SO4.2: 3 residues within 4Å: Chain A: K.70, T.74 Chain B: H.102 4 PLIP interactions: 1 interactions with chain B, 3 interactions with chain A Salt bridges: B:H.102, A:K.70 Hydrogen bonds: A:T.74, A:T.74 SO4.3: 2 residues within 4Å: Chain B: Y.186, R.193 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.186 Salt bridges: B:R.193

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sgromo, A. et al., DrosophilaBag-of-marbles directly interacts with the CAF40 subunit of the CCR4-NOT complex to elicit repression of mRNA targets. RNA (2018)

Release Date

2017-12-27

Peptides

CCR4-NOT transcription complex subunit 1: A
CCR4-NOT transcription complex subunit 9: B
Protein bag-of-marbles: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

CCR4-NOT transcription complex subunit 1

CCR4-NOT transcription complex subunit 9

Protein bag-of-marbles

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