SMTL ID : 5qik.1

TGF-BETA RECEPTOR TYPE 1 KINASE DOMAIN (T204D) IN COMPLEX WITH N-{4-[3-(6-fluoropyridin-3-yl)-4-oxo-4,5,6,7-tetrahydro-1H-pyrrolo[3,2-c]pyridin-2-yl]pyridin-2-yl}acetamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

monomer

Ligands

1 x J2M: N-{4-[3-(6-fluoropyridin-3-yl)-4-oxo-4,5,6,7-tetrahydro-1H-pyrrolo[3,2-c]pyridin-2-yl]pyridin-2-yl}acetamide(Non-covalent)

J2M.1: 23 residues within 4Å: Chain A: I.15, K.17, G.18, R.19, V.23, A.34, V.35, K.36, L.64, L.82, V.83, S.84, D.85, Y.86, H.87, E.88, H.89, G.90, K.141, N.142, L.144, A.154, D.155 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.15, A:V.23, A:A.34, A:K.36, A:L.144 Hydrogen bonds: A:K.36, A:H.87, A:H.87, A:D.155 Water bridges: A:S.91, A:N.142, A:D.155

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: H.2, M.3, T.4, W.28 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.4, A:T.4, A:T.4 Water bridges: A:H.2 GOL.3: 4 residues within 4Å: Chain A: D.73, G.75, T.76, W.77 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Discovery of 4-Azaindole Inhibitors of TGF beta RI as Immuno-oncology Agents. ACS Med Chem Lett (2018)

Release Date

2018-10-31

Peptides

TGF-beta receptor type-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TGF-beta receptor type-1

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