SMTL ID : 5qtz.1

TGF-BETA RECEPTOR TYPE 1 KINASE DOMAIN (T204D) IN COMPLEX WITH 6-[1-(2,2-DIFLUOROETHYL)-4-(6-METHYLPYRIDIN-2-YL)-1H-IMIDAZOL-5-YL]IMIDAZO[1,2-A]PYRIDINE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

monomer

Ligands

1 x QMY: 6-[1-(2,2-difluoroethyl)-4-(6-methylpyridin-2-yl)-1H-imidazol-5-yl]imidazo[1,2-a]pyridine(Non-covalent)

QMY.1: 22 residues within 4Å: Chain A: I.15, K.17, G.18, V.23, A.34, V.35, K.36, E.49, Y.53, L.64, F.66, L.82, V.83, S.84, D.85, Y.86, H.87, K.141, N.142, L.144, A.154, D.155 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.23, A:A.34, A:A.34, A:K.36, A:Y.53, A:L.64, A:L.144 Hydrogen bonds: A:K.36, A:H.87 Water bridges: A:D.155 Halogen bonds: A:D.155

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: D.73, G.75, T.76, W.77 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.73 GOL.3: 3 residues within 4Å: Chain A: M.3, T.4, I.67 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.4, A:T.4, A:T.4 GOL.4: 5 residues within 4Å: Chain A: Y.86, H.87, E.88, K.146, K.147 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.86, A:E.88, A:K.147 Water bridges: A:E.88, A:H.89, A:K.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Velaparthi, U. et al., Discovery of BMS-986260, a Potent, Selective, and Orally Bioavailable TGF beta R1 Inhibitor as an Immuno-oncology Agent. Acs Med.Chem.Lett. (2020)

Release Date

2020-02-05

Peptides

TGF-beta receptor type-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TGF-beta receptor type-1

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