SMTL ID : 5t08.1

Crystal structure of H6 hemagglutinin G225D mutant from Taiwan (2013) H6N1 influenza virus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

hetero-3-3-mer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: Q.19, D.21, N.27 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.21 Water bridges: A:Q.19 NAG.2: 2 residues within 4Å: Chain A: N.171, T.244 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.171, A:T.244, A:T.244 NAG.3: 1 residues within 4Å: Chain E: N.15 1 PLIP interactions: 1 interactions with chain E Water bridges: E:N.15 NAG.4: 2 residues within 4Å: Chain E: N.171, T.244 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:T.244, E:T.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

de Vries, R.P. et al., A single mutation in Taiwanese H6N1 influenza hemagglutinin switches binding to human-type receptors. EMBO Mol Med (2017)

Release Date

2017-06-14

Peptides

Hemagglutinin: ACE
Hemagglutinin HA2 chain: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
E

B
B

D
D

F
F

Hemagglutinin

Hemagglutinin HA2 chain

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