SMTL ID : 5t3v.1

A Novel domain in human EXOG converts apoptotic endonuclease to DNA-repair enzyme

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: G.82, H.83, N.114, W.118 No protein-ligand interaction detected (PLIP) MN.3: 5 residues within 4Å: Chain B: G.82, H.83, N.114, W.118, E.122 No protein-ligand interaction detected (PLIP)

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: R.52, P.86, A.87, G.88, K.91, R.126, R.257 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.88 Water bridges: A:A.87, A:A.87, A:R.126, A:R.126 Salt bridges: A:R.126, A:R.257 SO4.4: 6 residues within 4Å: Chain B: R.52, P.86, A.87, G.88, R.126, R.257 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:A.87, B:G.88 Salt bridges: B:R.52, B:R.126, B:R.257

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Szymanski, M.R. et al., A domain in human EXOG converts apoptotic endonuclease to DNA-repair exonuclease. Nat Commun (2017)

Release Date

2017-05-17

Peptides

Nuclease EXOG, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nuclease EXOG, mitochondrial

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