SMTL ID : 5t7t.1

Galectin-8 N terminal domain in complex with LNT

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

1 x NAG- GAL: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG-GAL.1: 7 residues within 4Å: Chain A: R.45, H.65, N.67, R.69, N.79, W.86, E.89 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.45, A:R.45, A:R.69, A:N.79, A:E.89, A:R.69, A:R.69 Water bridges: A:R.45

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: K.71, R.72, R.99 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bohari, M.H. et al., Structure-based rationale for differential recognition of lacto- and neolacto- series glycosphingolipids by the N-terminal domain of human galectin-8. Sci Rep (2016)

Release Date

2017-01-04

Peptides

Galectin-8: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Galectin-8

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