SMTL ID : 5t8p.1 (1 other biounit)

Crystal structure of murine NF-kappaB inducing kinase (NIK) bound to benzoxepin compound 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

monomer

Ligands

1 x 774: 6,7-dihydrothieno[4,5]oxepino[1,2-~{c}]pyridine-2-carboxamide(Non-covalent)

774.1: 13 residues within 4Å: Chain A: R.84, G.85, V.90, A.103, M.145, E.146, L.147, L.148, D.195, N.196, L.198, C.209, D.210 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.90, A:D.210 Hydrogen bonds: A:E.146, A:L.148

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 9 residues within 4Å: Chain A: H.78, P.80, R.81, V.82, G.83, R.84, V.90, H.91, R.92 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:H.78, A:V.82, A:G.83, A:R.92 Salt bridges: A:R.84, A:H.91, A:R.92 SO4.3: 4 residues within 4Å: Chain A: R.311, K.312, E.313, H.316 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.312, A:E.313, A:H.316 Salt bridges: A:R.311

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Castanedo, G.M. et al., Structure-Based Design of Tricyclic NF-kappa B Inducing Kinase (NIK) Inhibitors That Have High Selectivity over Phosphoinositide-3-kinase (PI3K). J. Med. Chem. (2017)

Release Date

2017-01-11

Peptides

Mitogen-activated protein kinase kinase kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase kinase kinase 14

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