SMTL ID : 5tet.1

TEV Cleaved Human ATP Citrate Lyase Bound to 4S Hydroxycitrate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 7A3: 3-C-carboxy-2-deoxy-D-erythro-pentaric acid(Non-covalent)

7A3.1: 15 residues within 4Å: Chain A: A.280, G.281, S.308, G.309, A.310, S.343, A.345, N.346, F.347, T.348, R.379 Chain B: V.140, G.178, G.179 Ligands: PO4.5 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:G.309, A:A.310, A:N.346, A:N.346, A:F.347, A:T.348, A:T.348, A:T.348, A:T.348 Water bridges: A:R.379 Salt bridges: A:R.379

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 8 residues within 4Å: Chain A: K.64, R.65, R.66, G.67, N.203, D.216, A.218 Ligands: GOL.3 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:R.65, A:R.66, A:N.203 Water bridges: A:I.63, A:R.66, A:G.67, A:N.203, A:D.216 Salt bridges: A:R.66 PO4.5: 11 residues within 4Å: Chain A: G.281, G.282, G.283, A.284, S.308 Chain B: S.177, G.178, G.179, M.180, H.274 Ligands: 7A3.1 8 PLIP interactions: 3 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:G.282, A:G.283, B:S.177, B:G.178, B:G.179 Water bridges: A:A.284, B:M.180 Salt bridges: B:H.274

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 12 residues within 4Å: Chain A: E.8, V.56, K.58, R.66, G.67, V.72, N.203, P.204, L.215, D.216, L.217 Ligands: PO4.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.58, A:D.216, A:D.216 Water bridges: A:L.215 GOL.4: 4 residues within 4Å: Chain A: Y.124, T.126, Y.131, K.151 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.124, A:K.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, J. et al., Binding of hydroxycitrate to human ATP-citrate lyase. Acta Crystallogr D Struct Biol (2017)

Release Date

2017-08-09

Peptides

ATP-citrate synthase: A
ATP-citrate synthase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ATP-citrate synthase

ATP-citrate synthase

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