SMTL ID : 5tf6.2 (1 other biounit)

Structure and conformational plasticity of the U6 small nuclear ribonucleoprotein core

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

3 x K: POTASSIUM ION(Non-covalent)(Non-functional Binders)

K.1: 3 residues within 4Å: Chain A: M.338, I.339, N.341 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:I.339, A:N.341 K.2: 1 residues within 4Å: Chain A: N.5 No protein-ligand interaction detected (PLIP) K.7: 3 residues within 4Å: Chain B: A.30, G.31, G.57 No protein-ligand interaction detected (PLIP)

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: S.161, P.163 Chain B: G.21, G.23 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: R.4, N.5, R.6, T.9 Ligand excluded by PLIP

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 4 residues within 4Å: Chain A: T.9, A.56, R.57, Y.58 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.58 GOL.6: 5 residues within 4Å: Chain A: Q.22, Y.26, I.36, H.37, V.38 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.22, A:H.37, A:V.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Montemayor, E.J. et al., Structure and conformational plasticity of the U6 small nuclear ribonucleoprotein core. Acta Crystallogr D Struct Biol (2017)

Release Date

2017-01-11

Peptides

U4/U6 snRNA-associated-splicing factor PRP24: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

U4/U6 snRNA-associated-splicing factor PRP24

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