SMTL ID : 5th6.1 (3 other biounits)

Structure determination of a potent, selective antibody inhibitor of human MMP9 (apo MMP9)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.62, H.189, H.193, H.199 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.62, A:H.189, A:H.193, A:H.199 ZN.2: 4 residues within 4Å: Chain A: H.138, D.140, H.153, H.166 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.138, A:D.140, A:H.153, A:H.166

3 x CA: CALCIUM ION(Non-covalent)

CA.3: 4 residues within 4Å: Chain A: D.128, G.160, Q.162, D.164 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.128, A:G.160, A:Q.162, A:D.164, H2O.1, H2O.2 CA.4: 7 residues within 4Å: Chain A: D.145, G.146, K.147, D.148, L.150, D.168, E.171 6 PLIP interactions: 6 interactions with chain A Metal complexes: A:D.145, A:G.146, A:D.148, A:L.150, A:D.168, A:E.171 CA.5: 4 residues within 4Å: Chain A: S.92, D.94, D.169, E.171 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.94, A:D.169, A:D.169, A:E.171, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Appleby, T.C. et al., Biochemical characterization and structure determination of a potent, selective antibody inhibitor of human MMP9. J. Biol. Chem. (2017)

Release Date

2017-03-01

Peptides

Matrix metalloproteinase-9,Matrix metalloproteinase-9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Matrix metalloproteinase-9,Matrix metalloproteinase-9

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