SMTL ID : 5tue.2 (1 other biounit)

Crystal structure of tetracycline destructase Tet(50)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: K.302, G.303 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.303 SO4.2: 1 residues within 4Å: Chain A: N.269 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.269 SO4.3: 3 residues within 4Å: Chain A: P.208, Y.210, R.280 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.280

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.4: 31 residues within 4Å: Chain A: I.31, G.32, V.33, G.34, V.35, A.36, I.54, E.55, K.56, S.57, R.61, G.63, G.64, Q.65, L.67, R.126, Q.146, S.147, V.148, A.176, D.177, G.178, A.182, Y.288, G.309, D.310, C.314, P.317, G.322, N.323, A.326 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:R.61, A:Y.288 Hydrogen bonds: A:V.35, A:A.36, A:E.55, A:K.56, A:S.57, A:R.61, A:Q.65, A:R.126, A:R.126, A:G.178, A:D.310 Water bridges: A:G.34, A:G.37, A:V.148, A:V.148, A:D.177, A:D.177, A:A.182, A:A.311, A:A.311, A:G.320, A:G.320, A:N.323, A:N.323 Salt bridges: A:R.126 pi-Stacking: A:Y.288 pi-Cation interactions: A:R.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, J. et al., Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes. Nat. Chem. Biol. (2017)

Release Date

2017-05-10

Peptides

Tetracycline destructase Tet(50): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tetracycline destructase Tet(50)

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