SMTL ID : 5tvk.1

Crystal Structure of putative plasmid partition protein (BB_S35) from Borrelia burgdorferi B31 bound to AMPPNP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 17 residues within 4Å: Chain A: G.37, G.38, V.39, G.40, K.41, S.42, T.43, D.64, Q.66, S.68, D.151, R.206, I.230, S.231, E.232, R.233, L.236 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:G.38, A:V.39, A:G.40, A:K.41, A:K.41, A:K.41, A:S.42, A:S.42, A:T.43, A:T.43, A:D.64, A:S.68, A:S.68, A:R.206, A:S.231, A:R.233 pi-Cation interactions: A:R.206 ANP.4: 17 residues within 4Å: Chain B: G.37, G.38, V.39, G.40, K.41, S.42, T.43, D.64, S.68, D.151, R.206, S.231, E.232, R.233, L.236, N.237, I.240 21 PLIP interactions: 21 interactions with chain B Hydrogen bonds: B:G.38, B:V.39, B:G.40, B:K.41, B:K.41, B:S.42, B:S.42, B:S.42, B:T.43, B:T.43, B:D.64, B:D.64, B:S.68, B:S.68, B:R.206, B:R.206, B:S.231, B:E.232, B:R.233 Water bridges: B:S.68 pi-Cation interactions: B:R.206

2 x LI: LITHIUM ION(Non-covalent)

LI.2: 2 residues within 4Å: Chain A: K.57, N.105 No protein-ligand interaction detected (PLIP) LI.3: 1 residues within 4Å: Chain A: N.105 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

SSGCID et al., Crystal Structure of putative plasmid partition protein (BB_S35) from Borrelia burgdorferi B31 bound to AMPPNP. To be Published

Release Date

2016-11-23

Peptides

PF-32 protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PF-32 protein

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