SMTL ID : 5tvq.1

Mouse Tdp2 catalytic domain bound to SUMO2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: D.18, E.48 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.18, A:E.48, A:E.48, H2O.1, H2O.1

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 4 residues within 4Å: Chain A: Y.39, V.231, G.232, L.233 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.232, A:L.233

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schellenberg, M.J. et al., ZATT (ZNF451)-mediated resolution of topoisomerase 2 DNA-protein cross-links. Science (2017)

Release Date

2017-09-27

Peptides

Tyrosyl-DNA phosphodiesterase 2: A
Small ubiquitin-related modifier 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tyrosyl-DNA phosphodiesterase 2

Small ubiquitin-related modifier 2

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