SMTL ID : 5ukk.1

Human GRK2 in complex with human G-beta-gamma subunits and CCG211998 (14ak)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: H.319, E.331, V.332, Q.334, V.337, Y.339 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.319, A:E.331, A:Q.334, A:V.337

1 x 8DJ: 5-[(3S,4R)-3-{[(2H-1,3-benzodioxol-5-yl)oxy]methyl}piperidin-4-yl]-2-fluoro-N-[(pyridin-2-yl)methyl]benzamide(Non-covalent)

8DJ.2: 24 residues within 4Å: Chain A: I.168, G.169, R.170, G.171, G.172, F.173, G.174, E.175, V.176, A.189, L.193, L.206, A.207, E.210, V.226, L.242, D.243, M.245, D.249, A.292, L.295, D.306, A.451, D.452 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.168, A:V.176, A:V.176, A:V.176, A:L.193, A:L.206, A:L.295 Hydrogen bonds: A:G.172, A:F.173, A:G.174, A:M.245, A:D.306 pi-Cation interactions: A:K.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Waldschmidt, H.V. et al., Structure-Based Design of Highly Selective and Potent G Protein-Coupled Receptor Kinase 2 Inhibitors Based on Paroxetine. J. Med. Chem. (2017)

Release Date

2017-04-05

Peptides

Beta-adrenergic receptor kinase 1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

Beta-adrenergic receptor kinase 1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

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