SMTL ID : 5uy9.1

Prolyl isomerase Pin1 R14A mutant bound with Brd4 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x GLN- ALA- SER- TPO- PRO- ARG- NIT: Brd4 peptide(Non-covalent)

GLN-ALA-SER-TPO-PRO-ARG-NIT.1: 11 residues within 4Å: Chain A: K.63, R.68, R.69, S.114, S.115, D.121, L.122, Q.129, M.130, S.154 Ligands: SO4.4 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.69, A:L.122, A:Q.129 Water bridges: A:K.63, A:K.63 Salt bridges: A:K.63, A:R.68, A:R.69

1 x PE4: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL(Non-functional Binders)

PE4.2: 11 residues within 4Å: Chain A: Y.23, N.30, A.31, S.32, Q.33, W.34, I.93, K.97, M.146, S.147, G.148 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.31 Hydrogen bonds: A:S.32, A:K.97 Water bridges: A:S.32, A:S.32

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 5 residues within 4Å: Chain A: R.69, S.72, W.73, C.113, S.114 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:W.73, A:S.114 Water bridges: A:S.115 Salt bridges: A:R.69 SO4.4: 1 residues within 4Å: Ligands: GLN-ALA-SER-TPO-PRO-ARG-NIT.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, X. et al., Prolyl isomerase PIN1 regulates the stability, transcriptional activity and oncogenic potential of BRD4. Oncogene (2017)

Release Date

2017-04-26

Peptides

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1

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