SMTL ID : 5v2x.1 (1 other biounit)

Ethylene forming enzyme in complex with manganese and 2-oxoglutarate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: H.191, D.193, H.270 Ligands: AKG.2, AKG.3 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.191, A:D.193, A:H.270, H2O.1, H2O.2

2 x AKG: 2-OXOGLUTARIC ACID(Non-covalent)

AKG.2: 13 residues within 4Å: Chain A: R.173, L.175, F.177, I.188, H.191, L.208, H.270, V.272, R.279, A.281, A.283 Ligands: MN.1, AKG.3 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.175, A:L.208, A:A.283 Salt bridges: A:R.173, A:H.191, A:H.270, A:R.279 AKG.3: 14 residues within 4Å: Chain A: R.173, L.175, F.177, I.188, H.191, A.200, L.208, H.270, V.272, R.279, A.281, A.283 Ligands: MN.1, AKG.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.175 Water bridges: A:R.279 Salt bridges: A:R.173, A:H.191, A:H.270, A:R.279

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martinez, S. et al., Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist. J. Am. Chem. Soc. (2017)

Release Date

2017-08-16

Peptides

2-oxoglutarate-dependent ethylene/succinate-forming enzyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

2-oxoglutarate-dependent ethylene/succinate-forming enzyme

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