SMTL ID : 5vew.1 (1 other biounit)

Structure of the human GLP-1 receptor complex with PF-06372222

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x 97Y: N-{4-[(R)-(3,3-dimethylcyclobutyl)({6-[4-(trifluoromethyl)-1H-imidazol-1-yl]pyridin-3-yl}amino)methyl]benzene-1-carbonyl}-beta-alanine(Non-covalent)

97Y.1: 14 residues within 4Å: Chain A: V.355, V.356, L.359, F.371, R.372, K.375, S.376, L.378, T.379, M.421, L.425, V.429, N.430 Ligands: OLC.3 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:R.372, A:K.375, A:K.375, A:T.379, A:L.425 Hydrogen bonds: A:S.376, A:S.376, A:T.379, A:L.425, A:N.430

2 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.2: 10 residues within 4Å: Chain A: V.34, S.37, A.38, L.41, Y.52, L.55, N.56, I.62, F.290 Ligands: OLA.4 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.34, A:A.38, A:L.41, A:L.55, A:I.62 OLC.3: 2 residues within 4Å: Chain A: K.366 Ligands: 97Y.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.366

1 x OLA: OLEIC ACID(Non-covalent)

OLA.4: 3 residues within 4Å: Chain A: L.41, H.47 Ligands: OLC.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.41, A:L.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Song, G. et al., Human GLP-1 receptor transmembrane domain structure in complex with allosteric modulators. Nature (2017)

Release Date

2017-05-24

Peptides

Glucagon-like peptide 1 receptor,Endolysin chimera: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Glucagon-like peptide 1 receptor,Endolysin chimera

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