SMTL ID : 5vew.2 (1 other biounit)

Structure of the human GLP-1 receptor complex with PF-06372222

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

4 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.1: 4 residues within 4Å: Chain A: L.302, L.303, V.306, P.307 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.306 OLC.3: 9 residues within 4Å: Chain A: F.348, L.378, P.382, L.383, T.386, H.387, E.411, F.414 Ligands: 97Y.2 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.348, A:P.382, A:E.411, A:F.414 Hydrogen bonds: A:L.378 OLC.4: 5 residues within 4Å: Chain A: S.37, Y.52, L.55, N.56, F.290 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.55 OLC.5: 2 residues within 4Å: Chain A: K.366 Ligands: 97Y.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.366 Salt bridges: A:K.366

1 x 97Y: N-{4-[(R)-(3,3-dimethylcyclobutyl)({6-[4-(trifluoromethyl)-1H-imidazol-1-yl]pyridin-3-yl}amino)methyl]benzene-1-carbonyl}-beta-alanine(Non-covalent)

97Y.2: 15 residues within 4Å: Chain A: V.355, V.356, L.359, F.371, R.372, K.375, S.376, L.378, T.379, M.421, L.425, V.429, N.430 Ligands: OLC.3, OLC.5 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:R.372, A:K.375, A:K.375, A:T.379, A:L.425 Hydrogen bonds: A:S.376, A:S.376, A:T.379, A:T.379, A:L.425, A:N.430

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Song, G. et al., Human GLP-1 receptor transmembrane domain structure in complex with allosteric modulators. Nature (2017)

Release Date

2017-05-24

Peptides

Glucagon-like peptide 1 receptor,Endolysin chimera: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Glucagon-like peptide 1 receptor,Endolysin chimera

Related Entries With Identical Sequence