SMTL ID : 5vla.1

Short PCSK9 delta-P' complex with Fusion2 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)

CA.1: 3 residues within 4Å: Chain A: P.331, V.333, D.360 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:P.331, A:D.360, H2O.1, H2O.2, H2O.4 CA.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Discovery of a cryptic peptide-binding site on PCSK9 and design of antagonists. Nat. Struct. Mol. Biol. (2017)

Release Date

2017-08-16

Peptides

Proprotein convertase subtilisin/kexin type 9: A
THR-VAL-PHE-THR-SER-TRP-GLU-GLU-TYR-LEU-ASP-TRP-VAL-MET-PRO-TRP-ASN-LEU-VAL-ARG-ILE-GLY-LEU-LEU: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
Z

Proprotein convertase subtilisin/kexin type 9

THR-VAL-PHE-THR-SER-TRP-GLU-GLU-TYR-LEU-ASP-TRP-VAL-MET-PRO-TRP-ASN-LEU-VAL-ARG-ILE-GLY-LEU-LEU

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