SMTL ID : 5vyw.1

Crystal structure of Lactococcus lactis pyruvate carboxylase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-tetramer

Ligands

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: D.540, K.709, H.738, H.740 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.540, A:H.738, A:H.740 MN.3: 4 residues within 4Å: Chain B: D.540, K.709, H.738, H.740 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:D.540, B:H.738, B:H.740 MN.4: 4 residues within 4Å: Chain C: D.540, K.709, H.738, H.740 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:D.540, C:H.738, C:H.740 MN.5: 4 residues within 4Å: Chain D: D.540, K.709, H.738, H.740 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:D.540, D:H.738, D:H.740

1 x BTN: BIOTIN(Non-covalent)

BTN.2: 10 residues within 4Å: Chain A: Y.473, M.476, N.480, G.481, F.482, P.483, R.585, F.586, N.588, M.988 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Choi, P.H. et al., Structural and functional studies of pyruvate carboxylase regulation by cyclic di-AMP in lactic acid bacteria. Proc. Natl. Acad. Sci. U.S.A. (2017)

Release Date

2017-08-16

Peptides

Pyruvate carboxylase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Pyruvate carboxylase

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