- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.18 Å
- Oligo State
- hetero-2-4-mer
- Ligands
- 2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: S.21, D.61
- Ligands: GDP.1
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:S.21
MG.8: 2 residues within 4Å:- Chain D: S.21
- Ligands: GDP.7
3 PLIP interactions:1 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:S.21, H2O.4, H2O.4
- 6 x CA: CALCIUM ION(Non-covalent)
CA.3: 3 residues within 4Å:- Chain A: E.67
- Chain B: A.35
- Chain F: D.19
3 PLIP interactions:1 interactions with chain F, 1 interactions with chain B, 1 interactions with chain A- Metal complexes: F:D.19, B:A.35, A:E.67
CA.4: 4 residues within 4Å:- Chain A: E.67, Y.68
- Chain F: D.19, E.22
5 PLIP interactions:2 interactions with chain A, 2 interactions with chain F, 1 Ligand-Water interactions- Metal complexes: A:E.67, A:Y.68, F:D.19, F:E.22, H2O.2
CA.5: 3 residues within 4Å:- Chain C: D.19
- Chain D: E.67
- Chain E: A.35
5 PLIP interactions:1 interactions with chain C, 1 interactions with chain E, 2 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: C:D.19, E:A.35, D:E.67, D:E.67, H2O.3
CA.6: 5 residues within 4Å:- Chain C: D.19, E.22
- Chain D: E.67, Y.68
- Chain E: A.35
4 PLIP interactions:2 interactions with chain C, 2 interactions with chain D- Metal complexes: C:D.19, C:E.22, D:E.67, D:Y.68
CA.9: 2 residues within 4Å:- Chain D: K.9
- Chain F: W.28
No protein-ligand interaction detected (PLIP)CA.10: 5 residues within 4Å:- Chain D: E.7, R.45, D.58
- Chain E: H.21, W.24
2 PLIP interactions:1 interactions with chain D, 1 interactions with chain E- Metal complexes: D:D.58, E:H.21
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McGee, J.H. et al., Exceptionally high-affinity Ras binders that remodel its effector domain. J. Biol. Chem. (2018)
- Release Date
- 2018-01-03
- Peptides
- GTPase KRas: AD
Ras binder peptide: 225-11 (A30R): BCEF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AD
JB
BC
CE
KF
L
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.18 Å
- Oligo State
- hetero-2-4-mer
- Ligands
- 2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 6 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McGee, J.H. et al., Exceptionally high-affinity Ras binders that remodel its effector domain. J. Biol. Chem. (2018)
- Release Date
- 2018-01-03
- Peptides
- GTPase KRas: AD
Ras binder peptide: 225-11 (A30R): BCEF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AD
JB
BC
CE
KF
L