SMTL ID : 5wq6.3 (3 other biounits)

Crystal Structure of hMNDA-PYD with MBP tag

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 15 residues within 4Å: Chain A: N.13, D.15, K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, M.331, W.341 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:W.63, A:R.67, A:R.67, A:E.154, A:Y.156 Water bridges: A:E.45

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: Y.177, M.331, P.332, N.333 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.177, A:N.333, A:N.333 Water bridges: A:N.333 EDO.3: 5 residues within 4Å: Chain A: P.49, G.70, Y.71, S.74, L.76 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.74, A:S.74 Water bridges: A:Y.71, A:P.335, A:S.338, A:S.338 EDO.4: 5 residues within 4Å: Chain A: D.288, E.289, E.292, Y.308, E.311 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.311

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jin, T.C. et al., Design of an expression system to enhance MBP-mediated crystallization. Sci Rep (2017)

Release Date

2017-02-15

Peptides

MBP tagged hMNDA-PYD: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

MBP tagged hMNDA-PYD

Related Entries With Identical Sequence