SMTL ID : 5wt3.1

Pyrococcus abyssi methyltransferase PaTrm5a bound by MTA and cognate tRNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x MTA: 5'-DEOXY-5'-METHYLTHIOADENOSINE(Non-covalent)

MTA.1: 14 residues within 4Å: Chain A: L.131, Y.132, F.165, F.191, G.193, E.213, I.214, N.215, G.242, D.243, V.244, F.245, P.262 Chain B: G.38 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:I.214, A:N.215, A:D.243, A:D.243, A:V.244 pi-Stacking: A:F.191, A:F.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, C. et al., Structural insight into the methyltransfer mechanism of the bifunctional Trm5. Sci Adv (2017)

Release Date

2017-12-13

Peptides

tRNA (guanine(37)-N1)-methyltransferase Trm5a: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

tRNA (guanine(37)-N1)-methyltransferase Trm5a

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