SMTL ID : 5x8q.1 (3 other biounits)

Crystal Structure of the mutant Human ROR gamma Ligand Binding Domain With rockogenin.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 82R: (1R,2S,4S,5'R,6R,7S,8R,9S,10R,12S,13S,16S,18S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane-6,2'-oxane]-10,16-diol(Non-covalent)

82R.1: 16 residues within 4Å: Chain A: C.25, Q.26, L.32, C.60, H.63, L.64, A.67, V.101, R.104, M.105, A.108, F.117, F.118, F.128, I.137, I.140 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.32, A:H.63, A:L.64, A:A.67, A:V.101, A:R.104, A:A.108, A:F.118, A:F.128, A:I.137, A:I.140 Hydrogen bonds: A:L.27 Water bridges: A:E.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Noguchi, M. et al., Ternary complex of human ROR gamma ligand-binding domain, inverse agonist and SMRT peptide shows a unique mechanism of corepressor recruitment. Genes Cells (2017)

Release Date

2017-06-07

Peptides

Nuclear receptor ROR-gamma: A
Nuclear receptor corepressor 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nuclear receptor ROR-gamma

Nuclear receptor corepressor 2

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