SMTL ID : 7sqa.1 (1 other biounit)

PPAR gamma LBD bound to SR10221 and SMRT corepressor motif

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x A8R: (2S)-2-{5-[(5-{[(1S)-1-(4-tert-butylphenyl)ethyl]carbamoyl}-2,3-dimethyl-1H-indol-1-yl)methyl]-2-chlorophenoxy}propanoic acid(Non-covalent)

A8R.1: 22 residues within 4Å: Chain A: F.77, I.94, G.97, C.98, R.101, S.102, V.103, V.106, V.135, H.136, I.139, Y.140, L.143, V.152, I.154, S.155, M.161, F.176, M.177, K.180, H.262 Chain B: L.5 16 PLIP interactions: 14 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:F.77, A:V.103, A:V.135, A:I.139, A:L.143, A:L.143, A:I.154, A:I.154, A:F.176, A:F.176, B:L.5, B:L.5 Hydrogen bonds: A:C.98, A:S.102, A:Y.140, A:S.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Frkic, R.L. et al., PPAR gamma Corepression Involves Alternate Ligand Conformation and Inflation of H12 Ensembles. Acs Chem.Biol. (2023)

Release Date

2023-05-10

Peptides

Peroxisome proliferator-activated receptor gamma: A
Nuclear receptor corepressor 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Peroxisome proliferator-activated receptor gamma

Nuclear receptor corepressor 2

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