SMTL ID : 5xc1.1 (1 other biounit)

Crystal structure of the complex of an aromatic mutant (W6A) of an alkali thermostable GH10 Xylanase from Bacillus sp. NG-27 with S-1,2-Propanediol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: N.293, R.352, D.355 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:R.352, A:D.355, H2O.3, H2O.3, H2O.5

1 x PGO: S-1,2-PROPANEDIOL(Non-covalent)

PGO.2: 6 residues within 4Å: Chain A: F.5, A.6, A.7, R.34, V.38, Y.344 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.6, A:A.7, A:R.34

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain A: S.19, D.303, L.306, S.307 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.306

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bansia, H. et al., Small Glycols Discover Cryptic Pockets on Proteins for Fragment-Based Approaches. J.Chem.Inf.Model. (2021)

Release Date

2018-03-28

Peptides

Beta-xylanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-xylanase

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