SMTL ID : 5xez.2 (1 other biounit)

Structure of the Full-length glucagon class B G protein-coupled receptor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: Y.16, Q.19, C.20, N.23, C.44 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.19 NAG-NAG.2: 2 residues within 4Å: Chain A: N.55, F.74 No protein-ligand interaction detected (PLIP)

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 2 residues within 4Å: Chain A: P.30, N.36 No protein-ligand interaction detected (PLIP) NAG.4: 1 residues within 4Å: Chain A: N.51 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.51

1 x 97V: 4-{[(4-cyclohexylphenyl){[3-(methylsulfonyl)phenyl]carbamoyl}amino]methyl}-N-(1H-tetrazol-5-yl)benzamide(Non-covalent)

97V.5: 9 residues within 4Å: Chain A: R.480, L.481, K.483, S.484, L.486, T.487, L.533, L.537, N.538 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:K.483, A:K.483, A:K.483, A:L.486, A:T.487 Hydrogen bonds: A:S.484, A:S.484, A:S.484, A:T.487, A:N.538

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, H. et al., Structure of the full-length glucagon class B G-protein-coupled receptor. Nature (2017)

Release Date

2017-05-24

Peptides

Glucagon receptor,Endolysin,Glucagon receptor: A
Antibody, mAb1, heavy chain: B
Antibody, mAb1, light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
H

C
L

Membrane

We predict this structure to be a membrane protein.
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Glucagon receptor,Endolysin,Glucagon receptor

Antibody, mAb1, heavy chain

Antibody, mAb1, light chain

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