SMTL ID : 5xf1.2 (1 other biounit)

Structure of the Full-length glucagon class B G protein-coupled receptor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.19 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: Y.16, Q.19, N.23, C.44, W.60 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 1 residues within 4Å: Chain A: N.55 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-NAG.2: 3 residues within 4Å: Chain A: P.30, N.36, Q.82 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 2 residues within 4Å: Chain A: A.50, N.51 No protein-ligand interaction detected (PLIP)

1 x 97V: 4-{[(4-cyclohexylphenyl){[3-(methylsulfonyl)phenyl]carbamoyl}amino]methyl}-N-(1H-tetrazol-5-yl)benzamide(Non-covalent)

97V.5: 9 residues within 4Å: Chain A: R.480, L.481, K.483, S.484, L.486, T.487, L.533, L.537, N.538 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:K.483, A:K.483, A:L.486, A:T.487 Hydrogen bonds: A:S.484, A:S.484, A:S.484, A:T.487

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, H. et al., Structure of the full-length glucagon class B G-protein-coupled receptor. Nature (2017)

Release Date

2017-05-24

Peptides

Glucagon receptor,Endolysin,Glucagon receptor: A
Antibody mAb1 Heavy chain: B
Antibody mAb1 Light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
H

C
L

Membrane

We predict this structure to be a membrane protein.
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Glucagon receptor,Endolysin,Glucagon receptor

Antibody mAb1 Heavy chain

Antibody mAb1 Light chain

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