SMTL ID : 5xtz.1 (1 other biounit)

Crystal structure of GAS41 YEATS bound to H3K27ac peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

hetero-4-1-mer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 9 residues within 4Å: Chain A: S.127, T.129, N.130 Chain B: V.55, K.56, P.89, Y.90, E.91 Ligands: ACT.2 7 PLIP interactions: 2 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:S.127, A:T.129, B:E.91 Hydrophobic interactions: B:K.56, B:P.89 Water bridges: B:Y.90 Salt bridges: B:K.56 ACT.2: 6 residues within 4Å: Chain A: F.125, Q.126, S.127, N.130, V.138 Ligands: ACT.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Q.126, A:N.130 Hydrogen bonds: A:S.127, A:N.130 Water bridges: A:V.139, A:V.139

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hsu, C.C. et al., Gas41 links histone acetylation to H2A.Z deposition and maintenance of embryonic stem cell identity. Cell Discov (2018)

Release Date

2018-06-27

Peptides

YEATS domain-containing protein 4: ABCD
THR-LYS-ALA-ALA-ARG-ALY-SER-ALA-PRO-ALA: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

YEATS domain-containing protein 4

THR-LYS-ALA-ALA-ARG-ALY-SER-ALA-PRO-ALA

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