SMTL ID : 5xva.1

Crystal Structure of PAK4 in complex with inhibitor CZH216

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x 8FU: [6-chloranyl-4-[(5-methyl-1H-pyrazol-3-yl)amino]quinazolin-2-yl]-[(3R)-3-methylpiperazin-1-yl]methanone(Non-covalent)

8FU.1: 16 residues within 4Å: Chain A: I.29, G.30, E.31, G.32, V.37, A.50, M.97, E.98, F.99, L.100, E.101, G.103, D.146, L.149, S.159, D.160 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.29, A:F.99, A:L.149 Hydrogen bonds: A:E.98, A:L.100, A:L.100, A:D.146 Water bridges: A:E.31, A:D.146 Halogen bonds: A:E.101

4 x EOH: ETHANOL(Non-functional Binders)

EOH.2: 6 residues within 4Å: Chain A: G.32, S.33, T.34, G.35, K.52, M.54 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:K.52 Hydrogen bonds: A:G.32, A:T.34, A:G.35 EOH.3: 5 residues within 4Å: Chain A: E.209, G.213, E.214, P.215, F.218 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:E.214, A:F.218 Hydrogen bonds: A:E.209 EOH.4: 2 residues within 4Å: Chain A: R.7, A.8 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.7 Water bridges: A:E.4 EOH.5: 5 residues within 4Å: Chain A: T.34, D.142, D.160, F.161, G.162 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:D.160 Hydrogen bonds: A:G.162 Water bridges: A:T.34, A:T.34, A:T.34, A:K.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hao, C. et al., Structure-Based Design of 6-Chloro-4-aminoquinazoline-2-carboxamide Derivatives as Potent and Selective p21-Activated Kinase 4 (PAK4) Inhibitors. J. Med. Chem. (2018)

Release Date

2018-02-07

Peptides

Serine/threonine-protein kinase PAK 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase PAK 4

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