SMTL ID : 5y6l.1

A subcomplex crystal structure of human cytosolic aspartyl-tRNA synthetase and heterotetrameric glutathione transferase-homology domains in multi-tRNA synthetase complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 3 residues within 4Å: Chain A: H.123, H.126, R.130 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:H.123, A:H.126, A:R.130 PO4.2: 6 residues within 4Å: Chain B: H.160, H.163, Y.164 Chain C: Y.111, N.115, S.116 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain C Hydrogen bonds: B:Y.164, C:Y.111, C:Y.111, C:N.115 Salt bridges: B:H.160, B:H.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cho, H.Y. et al., A subcomplex crystal structure of human cytosolic aspartyl-tRNA synthetase and heterotetrameric glutathione transferase-homology domains in multi-tRNA synthetase complex. To be published

Release Date

2018-08-15

Peptides

Methionine--tRNA ligase, cytoplasmic: A
Eukaryotic translation elongation factor 1 epsilon-1: B
Bifunctional glutamate/proline--tRNA ligase: C
Aminoacyl tRNA synthase complex-interacting multifunctional protein 2: D
Aspartate--tRNA ligase, cytoplasmic: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Methionine--tRNA ligase, cytoplasmic

Eukaryotic translation elongation factor 1 epsilon-1

Bifunctional glutamate/proline--tRNA ligase

Aminoacyl tRNA synthase complex-interacting multifunctional protein 2

Aspartate--tRNA ligase, cytoplasmic

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