- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 133 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.1: 11 residues within 4Å:- Chain A: A.5, L.6, P.7, R.23, G.24, F.25
- Chain B: W.116, F.138, F.140
- Ligands: CLA.2, ZEX.15
10 PLIP interactions:3 interactions with chain B, 7 interactions with chain A,- Hydrophobic interactions: B:W.116, B:W.116, B:F.140, A:A.5, A:L.6, A:P.7, A:R.23, A:F.25, A:F.25
- Salt bridges: A:R.23
CLA.2: 23 residues within 4Å:- Chain A: L.15, P.20, G.21, Y.22, R.23, G.24, F.25, D.26, F.30, S.31, L.39, Q.40, G.42, E.43, N.46, R.144, M.147, L.148
- Ligands: CLA.1, CLA.3, ZEX.14, ZEX.15, ZEX.17
13 PLIP interactions:13 interactions with chain A,- Hydrophobic interactions: A:F.25, A:D.26, A:F.30, A:L.39, A:E.43, A:E.43, A:R.144, A:R.144, A:L.148
- Hydrogen bonds: A:R.23, A:F.25
- pi-Cation interactions: A:R.144, A:R.144
CLA.3: 9 residues within 4Å:- Chain A: W.38, L.39, N.46, L.108, Y.109
- Ligands: CLA.2, CLA.7, ZEX.14, ZEX.17
2 PLIP interactions:2 interactions with chain A,- Hydrophobic interactions: A:L.39
- Hydrogen bonds: A:Y.109
CLA.4: 17 residues within 4Å:- Chain A: V.49, L.52, A.53, L.55, H.56, V.59, Y.63, Q.64, F.65, F.68, A.69, A.71, P.72, F.82
- Ligands: CLA.6, ZEX.14, ZEX.16
13 PLIP interactions:13 interactions with chain A,- Hydrophobic interactions: A:V.49, A:L.52, A:L.52, A:A.53, A:H.56, A:V.59, A:V.59, A:Q.64, A:F.82, A:F.82, A:F.82
- pi-Cation interactions: A:H.56, A:H.56
CLA.5: 3 residues within 4Å:- Chain A: A.87, Q.90
- Ligands: ZEX.16
1 PLIP interactions:1 interactions with chain A,- Hydrogen bonds: A:Q.90
CLA.6: 10 residues within 4Å:- Chain A: H.79, V.83, M.88, I.89, L.92
- Chain K: Y.38
- Ligands: CLA.4, CLA.7, ZEX.14, ZEX.17
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:V.83, A:M.88, A:I.89
- pi-Stacking: A:H.79, A:H.79
CLA.7: 16 residues within 4Å:- Chain A: W.38, E.41, K.45, N.46, V.49, L.92, I.95, G.96, E.99, F.100, H.103, K.106, L.108
- Chain I: F.158
- Ligands: CLA.3, CLA.6
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:V.49, A:V.49, A:L.92, A:L.92, A:F.100
- Salt bridges: A:K.45, A:H.103
- pi-Cation interactions: A:K.45, A:K.45, A:K.45
CLA.8: 17 residues within 4Å:- Chain A: R.48, M.51, L.52, G.120, E.121, G.123, F.124, N.125, P.130, D.132, M.135, R.136, R.138, E.139
- Ligands: CLA.10, ZEX.13, ZEX.16
14 PLIP interactions:14 interactions with chain A,- Hydrophobic interactions: A:R.48, A:M.51, A:L.52, A:L.52, A:F.124, A:R.136, A:E.139
- Hydrogen bonds: A:E.121, A:G.123, A:F.124, A:N.125, A:L.129
- Salt bridges: A:K.118
- pi-Cation interactions: A:R.48
CLA.9: 7 residues within 4Å:- Chain A: D.137, R.138, N.141, N.142, L.145
- Ligands: CLA.10, ZEX.15
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:N.141, A:L.145
- Hydrogen bonds: A:R.23, A:N.141
- Salt bridges: A:R.138
- pi-Cation interactions: A:R.23
CLA.10: 7 residues within 4Å:- Chain A: M.135, R.138, N.142, L.145
- Ligands: CLA.8, CLA.9, ZEX.13
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:R.138, A:L.145
- Salt bridges: A:R.138, A:R.138
CLA.11: 14 residues within 4Å:- Chain A: L.148, A.151, G.152, H.155, G.156, L.159, N.160, Q.167, P.173
- Ligands: CLA.12, ZEX.13, ZEX.15, ZEX.17, CLA.22
2 PLIP interactions:2 interactions with chain A,- Hydrophobic interactions: A:A.151, A:L.159
CLA.12: 5 residues within 4Å:- Chain A: H.155, F.158
- Ligands: CLA.11, ZEX.15, ZEX.17
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:F.158, A:F.158, A:F.158
- pi-Stacking: A:H.155, A:F.158
CLA.18: 13 residues within 4Å:- Chain B: P.22, F.23, E.38, G.39, F.41
- Chain C: F.106, A.110, Y.129, G.130, F.131
- Ligands: CLA.19, ZEX.34, ZEX.35
6 PLIP interactions:4 interactions with chain B, 2 interactions with chain C,- Hydrophobic interactions: B:F.23, B:F.41, C:F.106, C:A.110
- pi-Stacking: B:F.23, B:F.23
CLA.19: 23 residues within 4Å:- Chain B: D.31, L.34, P.35, G.36, G.39, C.40, F.41, D.42, F.46, T.47, L.55, R.56, A.58, E.59, H.62, R.166, M.169, I.170
- Ligands: CLA.18, CLA.20, ZEX.32, ZEX.34, ZEX.35
19 PLIP interactions:19 interactions with chain B,- Hydrophobic interactions: B:F.41, B:D.42, B:F.46, B:F.46, B:L.55, B:L.55, B:A.58, B:E.59, B:H.62, B:R.166, B:R.166, B:M.169, B:I.170
- Hydrogen bonds: B:F.41, B:T.47, B:T.47
- Salt bridges: B:R.166
- pi-Cation interactions: B:R.166, B:R.166
CLA.20: 10 residues within 4Å:- Chain B: W.54, L.55, A.58, H.62
- Ligands: CLA.19, CLA.23, CLA.24, CLA.29, ZEX.32, ZEX.34
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:L.55, B:A.58
- pi-Stacking: B:H.62, B:H.62
CLA.21: 16 residues within 4Å:- Chain B: L.68, L.71, G.72, A.75, Q.76, T.80, F.81, Y.84, L.96, F.100, L.106
- Ligands: CLA.22, CLA.23, CLA.30, ZEX.32, ZEX.33
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:L.68, B:L.68, B:L.71, B:L.71, B:T.80, B:F.100, B:F.100, B:L.106
CLA.22: 11 residues within 4Å:- Chain B: Y.84, F.100, A.105, L.106, Q.108, I.109, F.112
- Ligands: CLA.11, ZEX.15, CLA.21, ZEX.33
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:A.105, B:I.109, B:F.112, B:F.112
CLA.23: 10 residues within 4Å:- Chain B: H.97, V.101, L.106, Q.107, I.109, L.110
- Ligands: CLA.20, CLA.21, ZEX.32, ZEX.34
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:V.101, B:L.106, B:I.109, B:L.110
- pi-Stacking: B:H.97, B:H.97
- pi-Cation interactions: B:H.97
CLA.24: 14 residues within 4Å:- Chain B: W.54, E.57, A.58, K.61, H.62, L.110, V.113, C.114, E.117, F.118, L.122, L.125
- Ligands: CLA.20, ZEX.33
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:W.54, B:K.61, B:L.110, B:V.113, B:E.117, B:F.118, B:L.122
- Salt bridges: B:K.61
- pi-Cation interactions: B:K.61
CLA.25: 18 residues within 4Å:- Chain B: R.64, M.67, L.68, G.136, Y.137, F.138, G.139, F.140, D.141, L.143, W.154, M.157, Q.158, E.161, N.164
- Ligands: CLA.27, ZEX.31, ZEX.33
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:R.64, B:M.67, B:L.68, B:L.68, B:F.138, B:F.140, B:L.143, B:W.154, B:M.157, B:N.164
- Hydrogen bonds: B:Y.137, B:F.138
- Salt bridges: B:R.64
- pi-Cation interactions: B:R.64
CLA.26: 8 residues within 4Å:- Chain B: E.38, A.159, G.160, R.163, N.164, L.167
- Ligands: CLA.27, ZEX.35
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:R.163, B:L.167
- Salt bridges: B:R.163
- pi-Cation interactions: B:R.163, B:R.163
CLA.27: 4 residues within 4Å:- Chain B: N.164
- Ligands: CLA.25, CLA.26, ZEX.31
0 PLIP interactions:CLA.28: 12 residues within 4Å:- Chain B: I.170, A.171, G.173, G.174, H.177, Q.178, Q.189
- Ligands: CLA.29, ZEX.31, ZEX.34, ZEX.35, CLA.40
2 PLIP interactions:2 interactions with chain B,- Hydrophobic interactions: B:I.170, B:H.177
CLA.29: 7 residues within 4Å:- Chain B: F.176, H.177, L.180
- Ligands: CLA.20, CLA.28, ZEX.34, ZEX.35
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:F.176, B:F.176
- pi-Stacking: B:H.177, B:H.177
CLA.30: 5 residues within 4Å:- Chain B: L.71, F.78, G.79, T.80
- Ligands: CLA.21
2 PLIP interactions:2 interactions with chain B,- Hydrophobic interactions: B:L.71, B:T.80
CLA.36: 6 residues within 4Å:- Chain C: F.15, A.16, F.34
- Ligands: ZEX.50, ZEX.52, BCR.170
2 PLIP interactions:2 interactions with chain C,- Hydrophobic interactions: C:F.34, C:F.34
CLA.37: 23 residues within 4Å:- Chain C: A.28, G.29, S.30, A.32, E.33, F.34, D.35, I.39, T.40, M.48, R.49, S.51, E.52, H.55, R.156, M.159, I.160
- Ligands: CLA.38, CLA.47, ZEX.49, ZEX.50, ZEX.52, BCR.170
16 PLIP interactions:16 interactions with chain C,- Hydrophobic interactions: C:F.34, C:M.48, C:E.52, C:H.55, C:R.156, C:I.160, C:I.160
- Hydrogen bonds: C:A.32, C:E.33, C:F.34, C:I.39, C:T.40, C:T.40
- Salt bridges: C:R.49
- pi-Cation interactions: C:R.156, C:R.156
CLA.38: 9 residues within 4Å:- Chain C: W.47, S.51, H.55
- Ligands: CLA.37, CLA.41, CLA.42, CLA.47, ZEX.49, ZEX.52
3 PLIP interactions:3 interactions with chain C,- Hydrogen bonds: C:S.51
- pi-Stacking: C:H.55, C:H.55
CLA.39: 20 residues within 4Å:- Chain C: L.61, A.62, V.64, G.65, A.68, Q.69, Q.73, F.74, P.75, Y.77, K.78, P.81, A.87, F.91, A.95, I.99
- Ligands: CLA.40, CLA.41, ZEX.49, ZEX.51
9 PLIP interactions:9 interactions with chain C,- Hydrophobic interactions: C:L.61, C:L.61, C:V.64, C:A.68, C:F.74, C:A.87, C:F.91
- Hydrogen bonds: C:K.78
- Salt bridges: C:K.78
CLA.40: 11 residues within 4Å:- Chain B: L.181
- Chain C: Y.77, T.94, A.95, Q.98, I.99, F.102
- Ligands: CLA.28, ZEX.35, CLA.39, ZEX.51
2 PLIP interactions:2 interactions with chain C,- Hydrophobic interactions: C:F.102, C:F.102
CLA.41: 11 residues within 4Å:- Chain C: H.88, V.92, L.96, I.99, L.100
- Chain D: I.240
- Ligands: CLA.38, CLA.39, ZEX.49, ZEX.52, CLA.67
4 PLIP interactions:4 interactions with chain C,- Hydrophobic interactions: C:I.99, C:L.100
- Salt bridges: C:H.88
- pi-Stacking: C:H.88
CLA.42: 15 residues within 4Å:- Chain C: W.47, E.50, S.51, K.54, H.55, I.58, L.100, T.103, S.104, E.107, I.108, V.112, A.115
- Ligands: CLA.38, ZEX.51
14 PLIP interactions:14 interactions with chain C,- Hydrophobic interactions: C:W.47, C:K.54, C:K.54, C:I.58, C:L.100, C:T.103, C:E.107, C:I.108, C:V.112
- Hydrogen bonds: C:H.55
- Salt bridges: C:K.54
- pi-Cation interactions: C:K.54, C:K.54, C:K.54
CLA.43: 17 residues within 4Å:- Chain C: R.57, M.60, L.61, G.127, Y.128, Y.129, G.130, F.131, D.132, G.135, W.137, M.147, E.148, E.151
- Ligands: CLA.45, ZEX.48, ZEX.51
9 PLIP interactions:9 interactions with chain C,- Hydrophobic interactions: C:M.60, C:L.61, C:Y.128, C:F.131, C:W.137, C:E.151
- Hydrogen bonds: C:R.57
- pi-Cation interactions: C:R.57, C:R.57
CLA.44: 8 residues within 4Å:- Chain C: R.146, L.149, A.150, K.153, N.154, L.157
- Ligands: CLA.45, ZEX.50
7 PLIP interactions:7 interactions with chain C,- Hydrophobic interactions: C:L.157, C:L.157
- Hydrogen bonds: C:N.154
- Salt bridges: C:R.146
- pi-Cation interactions: C:K.153, C:K.153, C:K.153
CLA.45: 5 residues within 4Å:- Chain C: R.146, N.154
- Ligands: CLA.43, CLA.44, ZEX.48
1 PLIP interactions:1 interactions with chain C,- Salt bridges: C:R.146
CLA.46: 12 residues within 4Å:- Chain C: I.160, L.163, A.164, H.167, Q.168, L.171, S.172, Q.180
- Ligands: CLA.47, ZEX.48, ZEX.50, ZEX.52
5 PLIP interactions:5 interactions with chain C,- Hydrophobic interactions: C:L.163, C:A.164, C:H.167, C:L.171
- Hydrogen bonds: C:Q.168
CLA.47: 11 residues within 4Å:- Chain C: L.163, H.167, L.171
- Chain D: V.258, T.262
- Chain L: M.2
- Ligands: CLA.37, CLA.38, CLA.46, ZEX.50, 1DO.53
5 PLIP interactions:3 interactions with chain C, 2 interactions with chain D,- Hydrophobic interactions: C:L.163, D:V.258, D:T.262
- pi-Stacking: C:H.167, C:H.167
CLA.55: 25 residues within 4Å:- Chain D: W.25, P.28, I.45, W.46, L.48, H.49
- Chain I: I.143
- Chain K: Y.6, A.10, P.11, T.15, L.18, F.19, A.22
- Ligands: CLA.56, CLA.60, CLA.63, CLA.91, PQN.93, LHG.94, CLA.105, CLA.107, CLA.110, BCR.165, BCR.166
14 PLIP interactions:5 interactions with chain K, 8 interactions with chain D, 1 interactions with chain I,- Hydrophobic interactions: K:Y.6, K:P.11, K:T.15, K:L.18, K:A.22, D:P.28, D:I.45, D:I.45, D:W.46, D:W.46, D:L.48, I:I.143
- pi-Stacking: D:H.49, D:H.49
CLA.56: 22 residues within 4Å:- Chain D: W.25, H.30, F.31, L.48, H.49, A.52, H.53, F.55, H.58, K.68, A.72, G.75, Q.76, I.79
- Ligands: CLA.55, CLA.57, CLA.58, CLA.61, CLA.63, CLA.82, LHG.94, BCR.166
9 PLIP interactions:9 interactions with chain D,- Hydrophobic interactions: D:W.25, D:H.49, D:A.52, D:A.72, D:I.79
- Salt bridges: D:H.30, D:K.68
- pi-Stacking: D:H.53, D:H.53
CLA.57: 26 residues within 4Å:- Chain D: H.53, F.55, I.69, A.72, H.73, Q.76, L.77, I.80, F.81, L.84, W.345, H.346, N.348, L.349, N.352, L.353, L.356
- Ligands: CLA.56, CLA.58, CLA.65, CLA.66, CLA.77, CLA.81, CLA.82, BCR.96, BCR.97
17 PLIP interactions:17 interactions with chain D,- Hydrophobic interactions: D:F.55, D:A.72, D:Q.76, D:I.80, D:I.80, D:F.81, D:F.81, D:F.81, D:L.84, D:W.345, D:N.348, D:L.349, D:L.349
- Hydrogen bonds: D:N.352
- pi-Stacking: D:H.73, D:H.73
- pi-Cation interactions: D:H.73
CLA.58: 18 residues within 4Å:- Chain D: H.53, Q.76, I.79, I.80, W.83, L.356, I.393, F.396
- Ligands: CLA.56, CLA.57, CLA.60, CLA.63, CLA.80, CLA.81, CLA.82, LHG.94, BCR.97, BCR.165
6 PLIP interactions:6 interactions with chain D,- Hydrophobic interactions: D:I.80, D:W.83, D:W.83, D:F.396, D:F.396
- Salt bridges: D:H.53
CLA.59: 16 residues within 4Å:- Chain D: I.82, W.83, S.85, G.86, M.87, F.89, H.90, F.94, Q.112, W.115, L.163
- Ligands: CLA.60, CLA.61, CLA.164, BCR.165, BCR.166
5 PLIP interactions:5 interactions with chain D,- Hydrophobic interactions: D:I.82, D:F.89
- pi-Stacking: D:H.90, D:H.90
- pi-Cation interactions: D:H.90
CLA.60: 27 residues within 4Å:- Chain D: W.83, M.87, A.111, Q.112, I.134, Q.135, I.136, T.137, S.138, L.140, A.664, Y.665, W.737
- Ligands: CLA.55, CLA.58, CLA.59, CLA.61, CLA.63, CLA.80, CLA.82, CLA.91, LHG.94, BCR.100, CLA.107, CLA.110, BCR.165, BCR.166
9 PLIP interactions:9 interactions with chain D,- Hydrophobic interactions: D:I.134, D:T.137, D:A.664, D:Y.665, D:Y.665, D:W.737
- Hydrogen bonds: D:T.137, D:S.138, D:S.138
CLA.61: 22 residues within 4Å:- Chain D: I.82, Q.112, V.113, V.114, W.115, I.117, Q.120, L.123, I.170, A.664, L.667
- Chain E: V.440, F.444
- Chain K: I.26
- Ligands: CLA.56, CLA.59, CLA.60, CLA.63, CLA.80, CLA.140, BCR.165, BCR.166
11 PLIP interactions:2 interactions with chain E, 7 interactions with chain D, 2 interactions with chain K,- Hydrophobic interactions: E:V.440, E:F.444, D:I.82, D:V.114, D:I.117, D:I.170, D:A.664, D:L.667, K:I.26, K:I.26
- Hydrogen bonds: D:Q.112
CLA.62: 15 residues within 4Å:- Chain C: R.120
- Chain D: V.11, V.13, R.15, F.70, F.74, L.168, M.169, A.172, F.175, H.176, A.180, W.186
- Ligands: CLA.64, CLA.65
12 PLIP interactions:12 interactions with chain D,- Hydrophobic interactions: D:V.11, D:F.70, D:F.74, D:F.74, D:L.168, D:A.172, D:F.175, D:W.186
- Salt bridges: D:R.15
- pi-Stacking: D:H.176, D:H.176
- Metal complexes: D:H.176
CLA.63: 26 residues within 4Å:- Chain D: V.18, P.19, T.20, S.21, F.22, K.24, W.25, H.30, K.68, S.71, G.75, I.79, I.170, G.173, W.174, Y.177, H.178
- Chain K: Y.6
- Ligands: CLA.55, CLA.56, CLA.58, CLA.60, CLA.61, LHG.94, BCR.165, BCR.166
15 PLIP interactions:15 interactions with chain D,- Hydrophobic interactions: D:F.22, D:K.24, D:W.25, D:K.68, D:I.79, D:W.174, D:Y.177
- Salt bridges: D:K.24, D:H.30, D:H.30
- pi-Stacking: D:Y.177, D:Y.177, D:H.178, D:H.178
- pi-Cation interactions: D:H.178
CLA.64: 10 residues within 4Å:- Chain D: V.9, V.11, W.186, N.189, S.192, H.196, T.310
- Ligands: CLA.62, CLA.65, CLA.72
6 PLIP interactions:6 interactions with chain D,- Hydrophobic interactions: D:V.9, D:V.11
- Hydrogen bonds: D:S.192
- Salt bridges: D:H.196
- pi-Stacking: D:H.196, D:H.196
CLA.65: 19 residues within 4Å:- Chain D: F.70, H.73, F.74, L.77, W.186, F.187, N.189, S.192, M.193, H.196, H.197, G.200, L.201
- Ligands: CLA.57, CLA.62, CLA.64, CLA.77, CLA.81, BCR.97
12 PLIP interactions:12 interactions with chain D,- Hydrophobic interactions: D:F.70, D:F.70, D:W.186, D:W.186, D:F.187, D:M.193, D:H.196, D:L.201
- Salt bridges: D:H.73
- pi-Stacking: D:H.73
- pi-Cation interactions: D:H.197, D:H.197
CLA.66: 21 residues within 4Å:- Chain D: S.147, G.148, I.149, Q.154, V.157, T.158, G.205, S.208, W.209, G.211, H.212, H.215, V.216, P.236, H.237, I.240
- Ligands: CLA.57, CLA.67, CLA.68, BCR.96, BCR.97
13 PLIP interactions:13 interactions with chain D,- Hydrophobic interactions: D:T.158, D:W.209, D:W.209, D:W.209, D:H.212, D:H.215, D:V.216, D:P.236, D:I.240
- Hydrogen bonds: D:H.237
- pi-Cation interactions: D:H.212, D:H.212, D:H.212
CLA.67: 17 residues within 4Å:- Chain D: L.207, S.208, G.211, I.214, H.215, I.240, R.243, F.253, G.256, L.257, Y.268, I.271, L.295
- Ligands: CLA.41, CLA.66, BCR.96, BCR.102
12 PLIP interactions:12 interactions with chain D,- Hydrophobic interactions: D:L.207, D:I.214, D:I.240, D:F.253, D:L.257, D:L.257, D:Y.268, D:I.271, D:L.295, D:L.295
- pi-Stacking: D:H.215, D:H.215
CLA.68: 8 residues within 4Å:- Chain D: L.153, Q.154, V.157, L.235, H.237, L.241
- Ligands: CLA.66, BCR.96
5 PLIP interactions:5 interactions with chain D,- Hydrophobic interactions: D:Q.154, D:V.157, D:L.241
- pi-Stacking: D:H.237, D:H.237
CLA.69: 20 residues within 4Å:- Chain D: F.260, W.265, K.266, Y.268, L.272, T.273, F.274, H.292, A.296, V.299, V.303, N.497
- Chain L: G.49, L.52, N.56
- Ligands: CLA.70, CLA.87, BCR.102, CLA.168, BCR.170
19 PLIP interactions:17 interactions with chain D, 2 interactions with chain L,- Hydrophobic interactions: D:W.265, D:W.265, D:W.265, D:W.265, D:Y.268, D:L.272, D:A.296, D:V.299, D:V.299, D:V.299, D:V.303, L:L.52
- Hydrogen bonds: D:N.497, L:N.56
- Salt bridges: D:K.266, D:H.292
- pi-Stacking: D:W.265, D:H.292, D:H.292
CLA.70: 20 residues within 4Å:- Chain D: T.273, F.274, G.276, L.285, D.289, V.290, H.292, H.293, A.296, L.300, H.366, M.370, T.501, A.502
- Ligands: CLA.69, CLA.71, CLA.79, CLA.86, CLA.87, CLA.90
12 PLIP interactions:12 interactions with chain D,- Hydrophobic interactions: D:F.274, D:F.274, D:F.274, D:L.285, D:D.289, D:V.290, D:H.292, D:L.300
- Hydrogen bonds: D:G.277
- pi-Cation interactions: D:H.293, D:H.293
- Metal complexes: D:H.293
CLA.71: 24 residues within 4Å:- Chain D: A.146, L.202, G.205, S.206, W.209, Q.213, L.287, H.293, H.294, I.297, F.301, L.359, I.362, V.363, H.366, M.367, P.372, Y.373
- Ligands: CLA.70, CLA.73, CLA.79, CLA.81, CLA.86, BCR.97
14 PLIP interactions:14 interactions with chain D,- Hydrophobic interactions: D:L.202, D:L.202, D:W.209, D:I.297, D:I.297, D:F.301, D:L.359, D:I.362, D:V.363, D:P.372
- Salt bridges: D:H.294
- pi-Stacking: D:W.209, D:H.294, D:H.294
CLA.72: 17 residues within 4Å:- Chain D: N.195, H.196, A.199, G.200, L.204, L.302, H.306, Y.308, T.310, W.312, I.314
- Chain L: I.37, A.38
- Ligands: CLA.64, BCR.102, CLA.169, BCR.170
7 PLIP interactions:7 interactions with chain D,- Hydrophobic interactions: D:A.199, D:L.204, D:L.302, D:W.312
- Hydrogen bonds: D:N.195, D:T.310
- pi-Stacking: D:H.306
CLA.73: 23 residues within 4Å:- Chain D: L.194, L.198, L.300, F.301, A.304, M.307, Y.308, I.318, I.321, M.355, M.426, L.547, V.550
- Ligands: CLA.71, CLA.75, CLA.76, CLA.77, CLA.78, CLA.79, CLA.83, CLA.86, BCR.98, BCR.99
9 PLIP interactions:9 interactions with chain D,- Hydrophobic interactions: D:L.194, D:L.198, D:L.300, D:F.301, D:F.301, D:A.304, D:L.547, D:V.550
- Hydrogen bonds: D:Y.308
CLA.74: 13 residues within 4Å:- Chain D: V.303, H.306, M.307, I.314, G.315, H.316, Q.320
- Chain L: V.23, Y.26, A.27, L.28
- Ligands: CLA.75, BCR.102
6 PLIP interactions:6 interactions with chain D,- Hydrophobic interactions: D:V.303, D:M.307, D:I.314
- Hydrogen bonds: D:G.315
- pi-Cation interactions: D:H.316, D:H.316
CLA.75: 13 residues within 4Å:- Chain D: H.316, Q.320, I.321, A.324, H.325
- Chain O: F.138, I.141
- Ligands: CLA.73, CLA.74, CLA.76, CLA.86, CLA.178, CLA.181
4 PLIP interactions:2 interactions with chain O, 2 interactions with chain D,- Hydrophobic interactions: O:F.138, O:I.141
- pi-Stacking: D:H.325, D:H.325
CLA.76: 18 residues within 4Å:- Chain D: I.321, L.322, H.325, H.334, L.337, V.422, L.423, M.426
- Ligands: CLA.73, CLA.75, CLA.77, CLA.78, CLA.83, CLA.86, CLA.90, LHG.95, BCR.98, CLA.178
7 PLIP interactions:7 interactions with chain D,- Hydrophobic interactions: D:L.337, D:L.337, D:V.422, D:L.423
- Salt bridges: D:H.325
- pi-Stacking: D:H.334, D:H.334
CLA.77: 23 residues within 4Å:- Chain D: L.184, F.187, V.190, M.193, L.194, H.197, L.198, L.201, I.318, L.341, T.342, W.345, N.348, I.351, N.352, M.355
- Ligands: CLA.57, CLA.65, CLA.73, CLA.76, CLA.79, CLA.81, BCR.98
19 PLIP interactions:19 interactions with chain D,- Hydrophobic interactions: D:L.184, D:F.187, D:V.190, D:V.190, D:M.193, D:L.194, D:L.194, D:L.194, D:L.201, D:I.318, D:L.341, D:L.341, D:T.342, D:W.345, D:W.345, D:W.345, D:I.351, D:N.352, D:M.355
CLA.78: 20 residues within 4Å:- Chain D: I.361, I.362, H.365, M.391, I.398, I.539, T.542, T.543, M.595, A.598, L.599
- Ligands: CLA.73, CLA.76, CLA.79, CLA.86, CLA.88, CLA.89, CLA.90, LHG.95, BCR.99
10 PLIP interactions:10 interactions with chain D,- Hydrophobic interactions: D:I.361, D:I.361, D:I.398, D:I.539, D:I.539, D:T.542, D:T.543, D:A.598, D:L.599
- Salt bridges: D:H.365
CLA.79: 20 residues within 4Å:- Chain D: M.355, L.359, I.362, H.365, H.366, Y.368, A.369, M.370, A.502, S.503, F.506
- Ligands: CLA.70, CLA.71, CLA.73, CLA.77, CLA.78, CLA.86, CLA.88, CLA.90, BCR.99
9 PLIP interactions:9 interactions with chain D,- Hydrophobic interactions: D:L.359, D:A.502, D:F.506, D:F.506, D:F.506
- pi-Cation interactions: D:H.366, D:H.366, D:H.366
- Metal complexes: D:H.366
CLA.80: 22 residues within 4Å:- Chain D: W.83, M.87, T.137, S.138, S.385, T.388, H.389, W.392, F.396, M.668, I.733, T.736, W.737
- Ligands: CLA.58, CLA.60, CLA.61, CLA.81, CLA.82, LHG.94, BCR.100, CLA.110, BCR.165
6 PLIP interactions:6 interactions with chain D,- Hydrophobic interactions: D:W.392, D:F.396, D:I.733, D:W.737
- pi-Cation interactions: D:H.389, D:H.389
CLA.81: 24 residues within 4Å:- Chain D: W.83, L.84, S.138, G.139, L.140, L.143, L.202, L.356, L.359, S.360, V.363, M.367, Y.373, L.386, H.389, H.390, I.393
- Ligands: CLA.57, CLA.58, CLA.65, CLA.71, CLA.77, CLA.80, BCR.97
15 PLIP interactions:15 interactions with chain D,- Hydrophobic interactions: D:W.83, D:W.83, D:L.140, D:L.143, D:L.202, D:L.202, D:L.359, D:V.363, D:L.386, D:I.393
- Hydrogen bonds: D:Y.373
- Salt bridges: D:H.390
- pi-Stacking: D:H.389, D:H.390, D:H.390
CLA.82: 30 residues within 4Å:- Chain D: H.49, A.50, H.53, D.54, H.346, L.349, L.353, F.396, C.397, V.399, G.400, H.404, I.407, R.411, F.567, R.568, W.585, V.588, L.592, A.726, L.730
- Ligands: CLA.56, CLA.57, CLA.58, CLA.60, CLA.80, CLA.91, LHG.94, BCR.100, CLA.107
16 PLIP interactions:16 interactions with chain D,- Hydrophobic interactions: D:L.349, D:L.349, D:L.353, D:L.353, D:V.399, D:V.588, D:L.592, D:A.726, D:L.730
- Hydrogen bonds: D:H.53
- Salt bridges: D:H.53, D:R.411, D:R.568
- pi-Stacking: D:H.404, D:H.404
- Metal complexes: D:H.404
CLA.83: 15 residues within 4Å:- Chain D: L.329, T.330, V.422, R.425, M.426, H.429, A.432, I.433, H.436
- Chain M: I.21
- Ligands: CLA.73, CLA.76, CLA.90, LHG.95, CLA.171
8 PLIP interactions:7 interactions with chain D, 1 interactions with chain M,- Hydrophobic interactions: D:L.329, D:V.422, D:I.433, D:H.436, M:I.21
- Salt bridges: D:R.425, D:H.429
- pi-Cation interactions: D:H.429
CLA.84: 21 residues within 4Å:- Chain D: W.439, I.442, F.443, M.446, H.447
- Chain E: W.22
- Chain M: L.65
- Ligands: CLA.85, CLA.89, CLA.92, CLA.103, CLA.117, CLA.146, CLA.147, PQN.149, BCR.155, DGD.156, BCR.163, BCR.172, CLA.175, BCR.176
7 PLIP interactions:1 interactions with chain M, 5 interactions with chain D, 1 interactions with chain E,- Hydrophobic interactions: M:L.65, D:W.439, D:F.443, D:F.443, E:W.22
- pi-Stacking: D:H.447, D:H.447
CLA.85: 24 residues within 4Å:- Chain D: M.446, G.450, L.451, I.453, H.454, M.458, R.463, D.466
- Chain E: H.95
- Chain M: P.61, F.62, L.65, P.67, L.85
- Ligands: CLA.84, CLA.103, CLA.108, CLA.117, CLA.118, BCR.163, BCR.172, CLA.174, CLA.175, BCR.177
11 PLIP interactions:3 interactions with chain M, 8 interactions with chain D,- Hydrophobic interactions: M:P.61, M:L.65, M:L.85, D:M.446, D:L.451, D:I.453, D:I.453
- Hydrogen bonds: D:R.463
- Salt bridges: D:H.454
- pi-Stacking: D:H.454, D:H.454
CLA.86: 22 residues within 4Å:- Chain D: I.483, I.486, H.487, A.490, T.494, A.495, A.502, F.506
- Chain O: F.123, I.126
- Ligands: CLA.70, CLA.71, CLA.73, CLA.75, CLA.76, CLA.78, CLA.79, CLA.87, CLA.88, CLA.90, BCR.98, BCR.99
12 PLIP interactions:10 interactions with chain D, 2 interactions with chain O,- Hydrophobic interactions: D:I.483, D:I.483, D:I.486, D:T.494, D:A.502, D:F.506, O:F.123, O:I.126
- Hydrogen bonds: D:A.495
- pi-Stacking: D:H.487, D:H.487, D:H.487
CLA.87: 14 residues within 4Å:- Chain D: F.274, T.494, A.495, V.496, N.497
- Chain O: N.87, V.90, L.96
- Ligands: CLA.69, CLA.70, CLA.86, CLA.90, BCR.99, CLA.168
4 PLIP interactions:3 interactions with chain D, 1 interactions with chain O,- Hydrophobic interactions: D:V.496, O:L.96
- Hydrogen bonds: D:V.496, D:N.497
CLA.88: 20 residues within 4Å:- Chain D: H.365, Y.368, F.479, A.480, W.482, I.483, Q.484, F.506, I.522, L.524, H.532, H.535, I.539, V.602, H.605, K.609
- Ligands: CLA.78, CLA.79, CLA.86, CLA.89
16 PLIP interactions:16 interactions with chain D,- Hydrophobic interactions: D:F.479, D:W.482, D:I.483, D:I.522, D:L.524, D:L.524, D:H.535, D:I.539, D:V.602, D:K.609
- Salt bridges: D:H.487
- pi-Stacking: D:H.365, D:H.532, D:H.532
- pi-Cation interactions: D:H.532
- Metal complexes: D:H.532
CLA.89: 19 residues within 4Å:- Chain D: W.439, F.443, L.444, P.477, V.478, F.479, A.480, F.529, H.532, H.533, A.536, H.540
- Ligands: CLA.78, CLA.84, CLA.88, CLA.90, CLA.171, BCR.172, CLA.174
13 PLIP interactions:13 interactions with chain D,- Hydrophobic interactions: D:W.439, D:F.443, D:F.443, D:L.444, D:L.444, D:F.479, D:F.529
- Hydrogen bonds: D:F.479, D:A.480
- Salt bridges: D:H.532
- pi-Stacking: D:F.529, D:H.533, D:H.533
CLA.90: 20 residues within 4Å:- Chain D: I.433, L.437, V.440, A.536, I.539, H.540, T.543, L.547
- Ligands: CLA.70, CLA.76, CLA.78, CLA.79, CLA.83, CLA.86, CLA.87, CLA.89, LHG.95, BCR.98, BCR.99, CLA.171
10 PLIP interactions:10 interactions with chain D,- Hydrophobic interactions: D:I.433, D:L.437, D:L.437, D:V.440, D:I.539, D:T.543, D:L.547
- Salt bridges: D:H.540
- pi-Stacking: D:H.540, D:H.540
CLA.91: 23 residues within 4Å:- Chain D: W.46, F.674, V.675, F.678, F.682, L.715, Q.719, A.722, V.723, A.726, H.727, L.730
- Chain K: L.18
- Ligands: CLA.55, CLA.60, CLA.82, PQN.93, LHG.94, BCR.100, CLA.107, BCR.159, CLA.160, BCR.165
14 PLIP interactions:13 interactions with chain D, 1 interactions with chain K,- Hydrophobic interactions: D:F.674, D:F.678, D:F.682, D:L.715, D:V.723, D:V.723, D:L.730, D:L.730, K:L.18
- Hydrogen bonds: D:Q.719
- pi-Stacking: D:H.727, D:H.727, D:H.727
- Metal complexes: D:H.727
CLA.92: 21 residues within 4Å:- Chain D: S.435, N.438, W.439, I.442
- Chain E: L.676, A.679, H.680, T.683, A.686, I.689
- Chain M: H.54, L.89
- Ligands: CLA.84, CLA.146, CLA.147, PQN.149, BCR.155, CLA.171, BCR.172, CLA.174, BCR.176
10 PLIP interactions:7 interactions with chain E, 2 interactions with chain M, 1 interactions with chain D,- Hydrophobic interactions: E:L.676, E:L.676, E:T.683, E:A.686, E:I.689, E:I.689, M:L.89, M:L.89, D:I.442
- pi-Stacking: E:H.680
CLA.103: 28 residues within 4Å:- Chain D: N.438, C.441, I.442, G.445, M.446, F.449, G.450, I.453, F.537, L.544, I.545, L.590, F.593, W.594
- Chain E: L.653, A.656, T.657, F.659, M.660, Y.668, W.669, L.672
- Ligands: CLA.84, CLA.85, CLA.108, CLA.147, BCR.155, BCR.163
20 PLIP interactions:12 interactions with chain D, 8 interactions with chain E,- Hydrophobic interactions: D:I.442, D:F.449, D:I.453, D:I.545, D:L.590, D:L.590, D:F.593, E:L.653, E:A.656, E:T.657, E:F.659, E:Y.668, E:W.669, E:W.669
- pi-Stacking: D:W.594, D:W.594, D:W.594, D:W.594, D:W.594
- Hydrogen bonds: E:Y.668
CLA.104: 12 residues within 4Å:- Chain D: W.699, K.703
- Chain E: A.415, H.419, W.422
- Chain I: L.174
- Ligands: CLA.109, CLA.133, CLA.138, CLA.139, CLA.145, BCR.162
7 PLIP interactions:4 interactions with chain E, 2 interactions with chain D, 1 interactions with chain I,- Hydrophobic interactions: E:W.422, E:W.422, D:K.703, I:L.174
- pi-Stacking: E:H.419, E:H.419
- Salt bridges: D:K.703
CLA.105: 27 residues within 4Å:- Chain D: T.42, I.45, W.46, I.694, V.698, H.701, V.706, P.708, I.710, P.712, R.713
- Chain I: Y.128, L.129, E.142, L.145, A.150, M.154
- Chain K: A.10, V.13, L.16, W.17, L.20
- Ligands: CLA.55, PQN.93, CLA.109, BCR.159, CLA.160
17 PLIP interactions:11 interactions with chain D, 3 interactions with chain K, 3 interactions with chain I,- Hydrophobic interactions: D:T.42, D:I.45, D:W.46, D:I.694, D:V.698, D:V.706, D:P.708, D:P.708, D:I.710, D:P.712, D:P.712, K:V.13, K:W.17, K:L.20, I:L.129, I:L.145, I:A.150
CLA.107: 29 residues within 4Å:- Chain D: F.674, A.677, F.678, L.680, M.681, F.684, Y.689, W.690, L.693
- Chain E: S.421, S.424, L.425, G.428, F.429, L.432, L.523, T.527, L.530, I.531, L.576, F.579, W.580
- Ligands: CLA.55, CLA.60, CLA.82, CLA.91, BCR.100, CLA.110, BCR.159
21 PLIP interactions:13 interactions with chain E, 8 interactions with chain D,- Hydrophobic interactions: E:F.429, E:F.429, E:L.432, E:T.527, E:L.530, E:I.531, E:L.576, E:L.576, E:F.579, D:F.674, D:A.677, D:F.678, D:F.678, D:L.680, D:F.684, D:Y.689, D:W.690
- Hydrogen bonds: E:G.428
- pi-Stacking: E:W.580, E:W.580, E:W.580
CLA.108: 27 residues within 4Å:- Chain D: F.449, I.453, D.456, F.537, F.593, W.594, N.597, I.639, L.643, W.676, Y.728
- Chain E: W.646, L.649, F.650, H.652, L.653, W.655, A.656
- Ligands: CL0.54, CLA.85, CLA.103, CLA.111, CLA.117, CLA.118, CLA.147, BCR.155, BCR.163
21 PLIP interactions:10 interactions with chain E, 11 interactions with chain D,- Hydrophobic interactions: E:W.646, E:L.649, E:F.650, E:H.652, E:L.653, E:L.653, E:W.655, E:A.656, D:F.449, D:F.449, D:I.453, D:I.453, D:F.537, D:F.537, D:F.593, D:W.594, D:W.594, D:W.676, D:Y.728
- Hydrogen bonds: E:H.652
- Salt bridges: E:H.652
CLA.109: 20 residues within 4Å:- Chain D: I.697, A.700, H.701, L.704, V.706
- Chain E: S.418, S.421, W.422, L.425
- Chain I: I.121, G.122, V.124, G.125, Y.128, L.145
- Ligands: PQN.93, CLA.104, CLA.105, CLA.139, BCR.159
12 PLIP interactions:2 interactions with chain E, 6 interactions with chain D, 4 interactions with chain I,- Hydrophobic interactions: E:L.425, D:I.697, D:I.697, D:L.704, D:V.706, I:I.121, I:V.124, I:Y.128, I:L.145
- Hydrogen bonds: E:S.421
- pi-Stacking: D:H.701, D:H.701
CLA.110: 26 residues within 4Å:- Chain D: L.667, M.668, L.670, G.671, H.673, F.674, A.677
- Chain E: L.432, V.436, D.439, V.440, L.523, F.579, W.580, N.583, W.587, L.614, L.618
- Ligands: CL0.54, CLA.55, CLA.60, CLA.80, BCR.100, CLA.107, CLA.111, BCR.165
17 PLIP interactions:11 interactions with chain E, 6 interactions with chain D,- Hydrophobic interactions: E:L.432, E:V.436, E:V.436, E:V.440, E:L.523, E:W.580, E:W.580, E:N.583, E:W.587, E:W.587, D:L.667, D:H.673, D:F.674, D:F.674, D:F.674, D:A.677
- pi-Stacking: E:W.587
CLA.111: 25 residues within 4Å:- Chain D: L.643, L.647, W.648
- Chain E: T.431, Y.435, V.517, A.520, N.583, W.587, F.590, L.614, W.617, L.622, S.626, I.630, F.648, H.652, W.655, Y.715, T.718, Y.719, F.722
- Ligands: CL0.54, CLA.108, CLA.110
26 PLIP interactions:23 interactions with chain E, 3 interactions with chain D,- Hydrophobic interactions: E:Y.435, E:Y.435, E:V.517, E:W.587, E:W.587, E:W.587, E:F.590, E:F.590, E:L.614, E:W.617, E:W.617, E:W.617, E:L.622, E:I.630, E:F.648, E:W.655, E:W.655, E:Y.715, E:F.722, D:L.643, D:L.647, D:L.647
- pi-Stacking: E:F.648, E:H.652, E:H.652, E:W.655
CLA.112: 16 residues within 4Å:- Chain E: F.8, G.24, I.25, A.28, H.29, F.31, K.45, S.49, I.56
- Chain N: A.25, L.28
- Ligands: CLA.113, CLA.114, CLA.137, DGD.156, BCR.176
11 PLIP interactions:3 interactions with chain N, 8 interactions with chain E,- Hydrophobic interactions: N:L.28, N:L.28, E:I.25, E:A.28, E:F.31, E:I.56
- Hydrogen bonds: N:A.25
- Salt bridges: E:K.45
- pi-Stacking: E:H.29, E:H.29
- pi-Cation interactions: E:H.29
CLA.113: 25 residues within 4Å:- Chain E: H.29, F.31, E.32, Y.43, I.46, S.49, H.50, H.53, L.54, F.166, R.172, H.176, L.328, H.329, Q.331, L.332, A.335, L.336, L.339
- Ligands: CLA.112, CLA.114, CLA.121, CLA.132, CLA.137, BCR.151
17 PLIP interactions:17 interactions with chain E,- Hydrophobic interactions: E:F.31, E:F.31, E:Y.43, E:I.46, E:H.53, E:L.54, E:F.166, E:L.328, E:L.328, E:L.332, E:L.332, E:L.339, E:L.339
- Salt bridges: E:H.53
- pi-Stacking: E:H.53
- pi-Cation interactions: E:H.50, E:H.50
CLA.114: 16 residues within 4Å:- Chain E: H.29, H.53, I.56, I.57, W.60, I.376, L.379, L.380
- Ligands: CLA.112, CLA.113, CLA.116, CLA.135, CLA.136, CLA.137, BCR.151, DGD.156
9 PLIP interactions:9 interactions with chain E,- Hydrophobic interactions: E:I.57, E:W.60, E:W.60, E:I.376, E:L.379, E:L.380
- Salt bridges: E:H.29
- pi-Stacking: E:H.53, E:H.53
CLA.115: 24 residues within 4Å:- Chain E: L.59, W.60, S.62, G.63, F.66, H.67, W.70, Q.71, H.89, A.90, L.141
- Chain J: L.6, P.7, L.10, V.11, V.14
- Chain N: A.10, L.11, A.14, G.18, A.21
- Ligands: CLA.116, CLA.117, BCR.163
10 PLIP interactions:8 interactions with chain E, 1 interactions with chain J, 1 interactions with chain N,- Hydrophobic interactions: E:L.59, E:F.66, E:W.70, E:L.141, J:L.10, N:A.14
- Hydrogen bonds: E:Q.71
- Salt bridges: E:H.67
- pi-Stacking: E:H.67, E:H.67
CLA.116: 20 residues within 4Å:- Chain E: W.60, N.64, H.67, A.88, H.89, N.112, I.113, S.114, Y.115, S.116, V.643, W.644, M.647
- Ligands: CLA.114, CLA.115, CLA.117, CLA.135, CLA.137, BCR.155, BCR.163
9 PLIP interactions:9 interactions with chain E,- Hydrophobic interactions: E:A.88, E:Y.115, E:V.643, E:W.644
- Hydrogen bonds: E:Y.115, E:S.116
- pi-Stacking: E:H.89, E:H.89
- pi-Cation interactions: E:H.89
CLA.117: 29 residues within 4Å:- Chain D: T.457, A.460, L.461
- Chain E: H.89, I.91, W.92, D.93, H.95, F.96, N.112, V.643, W.646
- Chain J: P.19, S.22, M.23, L.26
- Ligands: CLA.84, CLA.85, CLA.108, CLA.115, CLA.116, CLA.118, CLA.135, CLA.137, CLA.147, BCR.155, DGD.156, BCR.163, BCR.176
15 PLIP interactions:10 interactions with chain E, 3 interactions with chain D, 2 interactions with chain J,- Hydrophobic interactions: E:I.91, E:F.96, E:V.643, E:W.646, D:T.457, D:A.460, D:L.461, J:P.19, J:L.26
- Hydrogen bonds: E:W.92, E:N.112
- pi-Stacking: E:H.95, E:F.96, E:W.646, E:W.646
CLA.118: 18 residues within 4Å:- Chain E: P.94, H.95
- Chain J: P.12, G.15, L.16, F.20
- Chain M: F.62, P.67, L.80, S.81, I.83, G.84, V.87
- Ligands: CLA.85, CLA.108, CLA.117, BCR.163, BCR.172
9 PLIP interactions:3 interactions with chain M, 4 interactions with chain J, 2 interactions with chain E,- Hydrophobic interactions: M:L.80, M:I.83, M:V.87, J:P.12, J:L.16, J:L.16, J:F.20
- pi-Stacking: E:H.95, E:H.95
CLA.119: 12 residues within 4Å:- Chain E: F.47, F.51, V.146, F.147, L.149, A.150, L.153, H.154, F.159, W.165
- Ligands: CLA.120, CLA.121
10 PLIP interactions:10 interactions with chain E,- Hydrophobic interactions: E:F.47, E:F.51, E:V.146, E:F.147, E:L.149, E:A.150, E:L.153, E:W.165
- pi-Stacking: E:H.154, E:H.154
CLA.120: 10 residues within 4Å:- Chain E: W.165, N.168, S.171, H.175, T.291, N.292, F.293
- Ligands: CLA.119, CLA.121, CLA.128
8 PLIP interactions:8 interactions with chain E,- Hydrophobic interactions: E:T.291, E:F.293
- Hydrogen bonds: E:N.168, E:S.171
- Salt bridges: E:H.175
- pi-Stacking: E:H.175, E:H.175
- pi-Cation interactions: E:H.175
CLA.121: 20 residues within 4Å:- Chain E: F.47, H.50, F.51, L.54, W.165, F.166, N.168, S.171, R.172, H.175, H.176, L.180, F.181
- Ligands: CLA.113, CLA.119, CLA.120, CLA.126, CLA.132, CLA.136, BCR.151
14 PLIP interactions:14 interactions with chain E,- Hydrophobic interactions: E:F.47, E:F.47, E:L.54, E:W.165, E:W.165, E:F.166, E:N.168, E:R.172, E:H.175, E:L.180, E:F.181
- Salt bridges: E:H.50
- pi-Stacking: E:H.176, E:H.176
CLA.122: 18 residues within 4Å:- Chain E: I.125, I.127, E.132, T.135, G.136, S.184, A.187, W.188, G.190, H.191, V.195, V.205, G.206, W.207, F.210
- Ligands: CLA.123, CLA.136, BCR.152
17 PLIP interactions:17 interactions with chain E,- Hydrophobic interactions: E:I.125, E:W.188, E:W.188, E:H.191, E:V.195, E:W.207, E:W.207, E:F.210, E:F.210
- Salt bridges: E:H.191
- pi-Stacking: E:W.188, E:W.207, E:W.207, E:W.207
- pi-Cation interactions: E:H.191, E:H.191, E:H.191
CLA.123: 18 residues within 4Å:- Chain E: L.186, A.187, T.189, G.190, V.193, H.194, F.210, P.214, H.216, G.219, L.220, Y.231, I.252, L.253, L.276
- Ligands: CLA.122, BCR.150, BCR.152
9 PLIP interactions:9 interactions with chain E,- Hydrophobic interactions: E:V.193, E:V.193, E:H.216, E:L.220, E:I.252, E:L.253, E:L.276
- pi-Stacking: E:H.194, E:H.194
CLA.124: 11 residues within 4Å:- Chain E: W.228, L.253, F.255, H.273, L.276, A.277, V.280, I.281, L.490
- Ligands: CLA.125, BCR.150
16 PLIP interactions:16 interactions with chain E,- Hydrophobic interactions: E:W.228, E:W.228, E:W.228, E:W.228, E:L.253, E:L.276, E:L.276, E:A.277, E:V.280, E:V.280, E:I.281, E:I.281
- Hydrogen bonds: E:F.255
- Salt bridges: E:H.273
- pi-Stacking: E:H.273
- pi-Cation interactions: E:H.273
CLA.125: 20 residues within 4Å:- Chain E: F.255, G.258, L.266, D.270, M.271, H.273, H.274, A.277, I.278, I.281, H.349, M.353, W.491, W.495
- Ligands: CLA.124, CLA.126, CLA.127, CLA.134, CLA.141, CLA.142
10 PLIP interactions:10 interactions with chain E,- Hydrophobic interactions: E:F.255, E:F.255, E:L.266, E:D.270, E:A.277, E:I.278, E:I.281
- Hydrogen bonds: E:G.258
- pi-Cation interactions: E:H.274, E:H.274
CLA.126: 24 residues within 4Å:- Chain E: W.121, T.124, L.180, F.181, S.184, S.185, W.188, M.271, H.274, H.275, I.278, F.282, V.342, L.345, V.346, M.350, P.355, Y.356
- Ligands: CLA.121, CLA.125, CLA.127, CLA.132, CLA.134, CLA.136
16 PLIP interactions:16 interactions with chain E,- Hydrophobic interactions: E:F.181, E:W.188, E:W.188, E:I.278, E:I.278, E:F.282, E:V.342, E:L.345, E:V.346, E:P.355, E:P.355, E:Y.356
- Salt bridges: E:H.275
- pi-Stacking: E:W.188, E:H.275, E:H.275
CLA.127: 19 residues within 4Å:- Chain E: L.173, L.177, I.281, F.282, A.285, M.288, Y.289, L.299, I.302
- Ligands: CLA.125, CLA.126, CLA.129, CLA.130, CLA.131, CLA.132, CLA.134, CLA.141, BCR.153, BCR.154
6 PLIP interactions:6 interactions with chain E,- Hydrophobic interactions: E:L.173, E:L.177, E:I.281, E:F.282, E:F.282, E:A.285
CLA.128: 14 residues within 4Å:- Chain E: N.174, H.175, A.178, G.179, V.183, H.287, Y.289, T.291, F.293, G.294, I.295
- Ligands: CLA.120, BCR.150, BCR.151
5 PLIP interactions:5 interactions with chain E,- Hydrophobic interactions: E:A.178, E:V.183
- Hydrogen bonds: E:T.291
- pi-Stacking: E:H.287, E:H.287
CLA.129: 9 residues within 4Å:- Chain E: V.284, H.287, M.288, I.295, G.296, H.297
- Ligands: CLA.127, CLA.130, BCR.150
5 PLIP interactions:5 interactions with chain E,- Hydrophobic interactions: E:V.284, E:I.295
- Hydrogen bonds: E:G.296
- pi-Stacking: E:H.297, E:H.297
CLA.130: 10 residues within 4Å:- Chain E: H.297, T.301, I.302, A.305, H.306
- Ligands: CLA.127, CLA.129, CLA.131, CLA.148, BCR.153
4 PLIP interactions:4 interactions with chain E,- Hydrophobic interactions: E:I.302
- Salt bridges: E:H.306
- pi-Stacking: E:H.306
- pi-Cation interactions: E:H.306
CLA.131: 17 residues within 4Å:- Chain E: I.302, L.303, H.306, L.313, H.317, I.320, F.330, V.405, L.406, M.409
- Ligands: CLA.127, CLA.130, CLA.132, CLA.138, CLA.148, BCR.153, BCR.154
9 PLIP interactions:9 interactions with chain E,- Hydrophobic interactions: E:L.303, E:L.313, E:I.320, E:F.330, E:V.405, E:L.406
- Salt bridges: E:H.306
- pi-Stacking: E:H.317, E:H.317
CLA.132: 22 residues within 4Å:- Chain E: N.169, R.172, L.173, H.176, L.177, F.181, F.282, L.299, Y.321, L.324, Q.331, L.334, A.335, S.338, L.339, V.342
- Ligands: CLA.113, CLA.121, CLA.126, CLA.127, CLA.131, CLA.134
15 PLIP interactions:15 interactions with chain E,- Hydrophobic interactions: E:R.172, E:L.173, E:L.173, E:L.173, E:F.181, E:F.282, E:F.282, E:L.299, E:Y.321, E:L.324, E:L.324, E:A.335
- Hydrogen bonds: E:R.172, E:H.176
- Salt bridges: E:H.176
CLA.133: 21 residues within 4Å:- Chain E: V.341, S.344, L.345, Q.348, Q.374, I.381, F.385, L.525, T.528, T.529, T.584, I.585
- Ligands: CLA.104, CLA.134, CLA.141, CLA.143, CLA.144, CLA.145, CLA.148, BCR.153, BCR.154
7 PLIP interactions:7 interactions with chain E,- Hydrophobic interactions: E:I.381, E:I.381, E:F.385, E:T.528, E:T.529, E:T.584, E:I.585
CLA.134: 21 residues within 4Å:- Chain E: A.337, S.338, V.341, L.345, Q.348, H.349, A.352, M.353, F.507
- Ligands: CLA.125, CLA.126, CLA.127, CLA.132, CLA.133, CLA.138, CLA.141, CLA.143, CLA.145, CLA.148, BCR.153, BCR.154
8 PLIP interactions:8 interactions with chain E,- Hydrophobic interactions: E:A.337, E:V.341, E:V.341, E:V.341, E:L.345, E:A.352, E:F.507
- pi-Stacking: E:H.349
CLA.135: 22 residues within 4Å:- Chain E: W.60, N.64, Y.115, S.116, V.118, A.368, T.371, H.372, Y.375, L.379, W.644, M.647, I.716, L.717, A.720, I.724
- Ligands: CLA.114, CLA.116, CLA.117, CLA.136, CLA.137, DGD.156
11 PLIP interactions:11 interactions with chain E,- Hydrophobic interactions: E:A.368, E:T.371, E:H.372, E:Y.375, E:Y.375, E:W.644, E:I.716, E:I.716, E:A.720
- pi-Stacking: E:H.372, E:H.372
CLA.136: 24 residues within 4Å:- Chain E: F.58, W.60, T.61, S.116, G.117, W.121, S.184, L.339, V.342, T.343, V.346, M.350, Y.356, L.369, H.372, H.373, I.376
- Ligands: CLA.114, CLA.121, CLA.122, CLA.126, CLA.135, BCR.151, BCR.152
15 PLIP interactions:15 interactions with chain E,- Hydrophobic interactions: E:F.58, E:T.61, E:W.121, E:L.339, E:V.342, E:T.343, E:V.346, E:V.346, E:L.369, E:I.376
- Salt bridges: E:H.373
- pi-Stacking: E:H.372, E:H.372, E:H.373, E:H.373
CLA.137: 28 residues within 4Å:- Chain E: I.25, A.26, T.27, H.29, D.30, H.329, L.336, L.379, L.380, G.383, H.387, I.390, R.394, Y.553, W.571, F.574, M.578, V.709, V.713
- Ligands: CLA.112, CLA.113, CLA.114, CLA.116, CLA.117, CLA.135, CLA.147, BCR.155, DGD.156
18 PLIP interactions:18 interactions with chain E,- Hydrophobic interactions: E:H.29, E:D.30, E:L.336, E:L.336, E:L.379, E:L.380, E:F.574, E:F.574, E:V.709, E:V.713
- Hydrogen bonds: E:H.29, E:D.30
- Salt bridges: E:H.29, E:R.394
- pi-Stacking: E:H.387, E:H.387
- pi-Cation interactions: E:H.329, E:H.387
CLA.138: 15 residues within 4Å:- Chain E: R.312, L.313, G.314, V.405, R.408, M.409, H.412, V.416, H.419
- Ligands: CLA.104, CLA.131, CLA.134, CLA.145, CLA.148, BCR.153
11 PLIP interactions:11 interactions with chain E,- Hydrophobic interactions: E:L.313, E:V.405, E:R.408, E:V.416, E:H.419
- Hydrogen bonds: E:G.314
- Salt bridges: E:R.408, E:H.412
- pi-Cation interactions: E:H.412, E:H.412, E:H.412
CLA.139: 20 residues within 4Å:- Chain E: W.422, L.425, F.426, F.429, H.430
- Chain I: A.111, F.114, L.115, T.118, I.121, G.122
- Ligands: BCR.100, CLA.104, CLA.109, CLA.140, CLA.144, BCR.159, BCR.162, BCR.165, 3XQ.167
12 PLIP interactions:6 interactions with chain E, 6 interactions with chain I,- Hydrophobic interactions: E:W.422, E:F.426, E:F.426, E:F.429, I:A.111, I:L.115
- pi-Stacking: E:H.430, E:H.430, I:F.114, I:F.114, I:F.114
- Hydrogen bonds: I:T.118
CLA.140: 21 residues within 4Å:- Chain D: V.118
- Chain E: F.429, G.433, V.436, H.437, V.440, K.449, I.451
- Chain I: Y.82, L.113
- Chain K: N.29, D.34, S.35, L.36
- Ligands: CLA.61, BCR.100, CLA.139, BCR.159, CLA.160, BCR.165, 3XQ.167
12 PLIP interactions:4 interactions with chain K, 6 interactions with chain E, 1 interactions with chain I, 1 interactions with chain D,- Hydrophobic interactions: K:L.36, E:H.437, E:V.440, I:L.113, D:V.118
- Hydrogen bonds: K:N.29, K:D.34, K:S.35
- Salt bridges: E:H.437, E:K.449
- pi-Cation interactions: E:H.437, E:H.437
CLA.141: 16 residues within 4Å:- Chain E: W.460, I.461, T.464, S.465, L.475, L.476, W.491, W.495, F.507
- Ligands: CLA.125, CLA.127, CLA.133, CLA.134, CLA.142, CLA.143, BCR.154
5 PLIP interactions:5 interactions with chain E,- Hydrophobic interactions: E:W.460, E:W.460, E:L.475, E:L.476, E:F.507
CLA.142: 8 residues within 4Å:- Chain E: L.475, N.482, A.486, A.487, W.491
- Ligands: CLA.125, CLA.141, BCR.154
4 PLIP interactions:4 interactions with chain E,- Hydrophobic interactions: E:L.475, E:A.486, E:W.491, E:W.491
CLA.143: 22 residues within 4Å:- Chain E: Q.348, Y.351, Y.370, Q.374, F.457, A.458, I.461, Q.462, F.507, L.508, I.510, H.518, I.521, V.588, Y.591, W.592, K.595
- Ligands: CLA.133, CLA.134, CLA.141, CLA.144, CLA.145
14 PLIP interactions:14 interactions with chain E,- Hydrophobic interactions: E:A.458, E:I.461, E:L.508, E:L.508, E:I.510, E:I.521, E:V.588, E:Y.591, E:Y.591, E:W.592, E:K.595
- Hydrogen bonds: E:Q.462
- pi-Stacking: E:H.518, E:H.518
CLA.144: 25 residues within 4Å:- Chain E: V.423, F.426, L.427, E.454, P.455, I.456, F.457, A.458, D.514, F.515, H.518, H.519, A.522, H.526
- Chain I: T.97, F.107, A.111, L.112, L.115
- Ligands: CLA.133, CLA.139, CLA.143, CLA.145, BCR.162, 3XQ.167
21 PLIP interactions:16 interactions with chain E, 5 interactions with chain I,- Hydrophobic interactions: E:V.423, E:F.426, E:F.426, E:F.426, E:L.427, E:L.427, E:F.457, E:F.457, I:T.97, I:F.107, I:F.107, I:L.112, I:L.115
- Hydrogen bonds: E:F.457, E:A.458
- Salt bridges: E:H.518
- pi-Stacking: E:F.457, E:F.515
- pi-Cation interactions: E:H.519, E:H.519, E:H.519
CLA.145: 14 residues within 4Å:- Chain E: V.416, L.420, V.423, A.522, L.525, H.526
- Ligands: CLA.104, CLA.133, CLA.134, CLA.138, CLA.143, CLA.144, CLA.148, BCR.154
7 PLIP interactions:7 interactions with chain E,- Hydrophobic interactions: E:V.416, E:L.420, E:L.420, E:L.420, E:V.423
- Salt bridges: E:H.526
- pi-Cation interactions: E:H.526
CLA.146: 28 residues within 4Å:- Chain E: T.18, I.21, W.22, I.673, L.676, A.677, H.680, I.689, R.690, W.691, K.692, D.693, P.695, V.696, L.698
- Chain J: P.19, F.20, F.27
- Chain M: I.88, Y.96, S.100
- Ligands: CLA.84, CLA.92, CLA.147, PQN.149, BCR.163, BCR.172, BCR.176
11 PLIP interactions:9 interactions with chain E, 2 interactions with chain J,- Hydrophobic interactions: E:T.18, E:I.21, E:W.22, E:I.673, E:W.691, E:P.695, E:P.695, E:L.698, J:F.20, J:F.27
- Hydrogen bonds: E:K.692
CLA.147: 30 residues within 4Å:- Chain E: W.22, F.650, L.653, V.654, T.657, M.660, F.661, L.698, V.706, V.709, H.710, V.713
- Chain J: F.20, M.23
- Chain M: I.88, L.91, G.92, L.95
- Ligands: CLA.84, CLA.92, CLA.103, CLA.108, CLA.117, CLA.137, CLA.146, PQN.149, BCR.155, DGD.156, BCR.163, BCR.176
13 PLIP interactions:10 interactions with chain E, 2 interactions with chain M, 1 interactions with chain J,- Hydrophobic interactions: E:F.650, E:L.653, E:V.654, E:F.661, E:L.698, E:V.706, E:V.713, M:L.91, M:L.95, J:M.23
- Salt bridges: E:H.710
- pi-Cation interactions: E:H.710, E:H.710
CLA.148: 13 residues within 4Å:- Chain E: H.306, R.307, P.308, P.309, S.310, R.312
- Ligands: CLA.130, CLA.131, CLA.133, CLA.134, CLA.138, CLA.145, BCR.153
3 PLIP interactions:3 interactions with chain E,- Hydrophobic interactions: E:P.308, E:P.309
- Salt bridges: E:R.312
CLA.160: 12 residues within 4Å:- Chain I: I.117, W.120, I.121, V.124, M.154
- Chain K: W.17, L.18, L.25
- Ligands: CLA.91, CLA.105, CLA.140, BCR.159
10 PLIP interactions:3 interactions with chain I, 7 interactions with chain K,- Hydrophobic interactions: I:I.117, I:W.120, I:I.121, K:L.18, K:L.25, K:L.25
- pi-Stacking: K:W.17, K:W.17, K:W.17, K:W.17
CLA.161: 7 residues within 4Å:- Chain E: F.457, W.460
- Chain I: D.98, G.99, D.100, W.101
- Ligands: BCR.162
3 PLIP interactions:3 interactions with chain E,- Hydrophobic interactions: E:F.457, E:F.457, E:W.460
CLA.164: 8 residues within 4Å:- Chain K: F.19, L.20, G.23, E.27, R.30, F.31
- Ligands: CLA.59, BCR.166
8 PLIP interactions:8 interactions with chain K,- Hydrophobic interactions: K:F.19, K:F.19, K:E.27, K:F.31
- Salt bridges: K:R.30
- pi-Cation interactions: K:R.30, K:R.30, K:R.30
CLA.168: 10 residues within 4Å:- Chain L: I.45, I.46, G.49, I.50, G.53, N.56, M.57
- Chain O: N.87
- Ligands: CLA.69, CLA.87
4 PLIP interactions:3 interactions with chain L, 1 interactions with chain O,- Hydrophobic interactions: L:I.45, L:I.46, L:N.56
- Hydrogen bonds: O:N.87
CLA.169: 11 residues within 4Å:- Chain D: F.260, F.261, L.263
- Chain L: M.2, P.10, M.13, N.17, H.44
- Ligands: CLA.72, BCR.96, BCR.170
4 PLIP interactions:1 interactions with chain L, 3 interactions with chain D,- pi-Stacking: L:H.44
- Hydrophobic interactions: D:F.260, D:F.261, D:L.263
CLA.171: 17 residues within 4Å:- Chain D: A.432, H.436, W.439
- Chain E: W.678, A.679, T.683, P.684
- Chain M: I.21, N.22, T.27
- Ligands: CLA.83, CLA.89, CLA.90, CLA.92, LHG.95, BCR.172, CLA.174
7 PLIP interactions:5 interactions with chain D, 2 interactions with chain M,- Hydrophobic interactions: D:W.439, D:W.439, D:W.439, M:N.22, M:T.27
- pi-Stacking: D:H.436, D:H.436
CLA.173: 7 residues within 4Å:- Chain M: Q.33, R.38, E.49, M.52, A.53
- Ligands: CLA.174, BCR.177
5 PLIP interactions:5 interactions with chain M,- Hydrophobic interactions: M:Q.33, M:A.53
- Salt bridges: M:R.38
- pi-Cation interactions: M:R.38, M:R.38
CLA.174: 18 residues within 4Å:- Chain E: L.685, I.689
- Chain M: Y.30, P.35, I.36, I.50, A.53, H.54, F.57
- Ligands: CLA.85, CLA.89, CLA.92, CLA.171, BCR.172, CLA.173, CLA.175, BCR.176, BCR.177
7 PLIP interactions:5 interactions with chain M, 2 interactions with chain E,- Hydrophobic interactions: M:I.36, M:F.57, M:F.57, E:L.685, E:I.689
- Salt bridges: M:H.54
- pi-Stacking: M:H.54
CLA.175: 12 residues within 4Å:- Chain M: Y.56, F.57, G.60, P.61, Q.64, L.65, L.135, L.136
- Ligands: CLA.84, CLA.85, CLA.174, BCR.177
7 PLIP interactions:7 interactions with chain M,- Hydrophobic interactions: M:Y.56, M:F.57, M:F.57, M:P.61, M:Q.64, M:L.65
- pi-Stacking: M:F.57
CLA.178: 19 residues within 4Å:- Chain D: H.325, K.326, G.327, P.328, L.329
- Chain O: Y.64, P.65, P.68, I.71, L.136, I.137, Q.140, I.141, Y.143, A.144
- Ligands: CLA.75, CLA.76, LHG.95, BCR.98
7 PLIP interactions:5 interactions with chain O, 2 interactions with chain D,- Hydrophobic interactions: O:P.68, O:I.71, O:I.71, O:I.141, O:A.144, D:H.325, D:P.328
CLA.179: 7 residues within 4Å:- Chain O: Q.110, P.112, T.113, G.114, F.121, W.122
- Ligands: CLA.180
1 PLIP interactions:1 interactions with chain O,- Hydrophobic interactions: O:P.112
CLA.180: 14 residues within 4Å:- Chain O: L.75, F.100, I.104, L.107, L.108, Q.110, Y.111, F.121, L.125, H.129, L.132, F.133, L.136
- Ligands: CLA.179
10 PLIP interactions:10 interactions with chain O,- Hydrophobic interactions: O:L.75, O:I.104, O:L.107, O:L.108, O:L.132, O:F.133, O:L.136
- Salt bridges: O:H.129
- pi-Stacking: O:H.129, O:H.129
CLA.181: 5 residues within 4Å:- Chain O: F.138, G.139, G.142, Y.146
- Ligands: CLA.75
2 PLIP interactions:2 interactions with chain O,- Hydrophobic interactions: O:F.138, O:Y.146
- 15 x ZEX: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol(Non-covalent)
ZEX.13: 20 residues within 4Å:- Chain A: M.51, L.52, C.54, L.55, F.124, N.125, P.126, L.127, N.128, N.142, L.145, A.146, G.149, G.152, I.153, P.164, I.168
- Ligands: CLA.8, CLA.10, CLA.11
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:L.52, A:L.55, A:L.127, A:L.145, A:I.153
- Hydrogen bonds: A:L.127, A:N.128
ZEX.14: 21 residues within 4Å:- Chain A: F.25, D.26, P.27, L.28, N.46, A.50, A.53, H.56, F.57, A.75, H.79, M.88, M.147, L.148, F.150
- Chain B: I.119
- Ligands: CLA.2, CLA.3, CLA.4, CLA.6, ZEX.17
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:N.46, A:A.50, A:F.150, A:F.150, A:F.150, A:F.150, B:I.119
- Hydrogen bonds: A:D.26, A:L.28
ZEX.15: 17 residues within 4Å:- Chain A: R.23, N.141, R.144, L.145, L.148, L.159
- Chain B: G.104, Q.108, L.111, F.112
- Ligands: CLA.1, CLA.2, CLA.9, CLA.11, CLA.12, ZEX.17, CLA.22
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:L.159, B:L.111, B:F.112
- Hydrogen bonds: A:N.141, A:R.144
ZEX.16: 10 residues within 4Å:- Chain A: K.45, R.48, V.49, L.52, P.66, F.68, I.95
- Ligands: CLA.4, CLA.5, CLA.8
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:P.66, A:F.68, A:I.95
- Hydrogen bonds: A:R.48
ZEX.17: 14 residues within 4Å:- Chain A: G.76, H.79, L.148, A.151, I.154, H.155, F.158
- Ligands: CLA.2, CLA.3, CLA.6, CLA.11, CLA.12, ZEX.14, ZEX.15
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:L.148, A:A.151, A:I.154, A:I.154, A:F.158
ZEX.31: 18 residues within 4Å:- Chain B: M.67, V.70, L.71, F.140, D.141, P.142, L.143, N.164, L.167, A.168, A.171, G.174, F.175, Q.178, I.186
- Ligands: CLA.25, CLA.27, CLA.28
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:M.67, B:V.70, B:V.70, B:L.71, B:L.143, B:L.167, B:A.168, B:A.171, B:F.175
- Hydrogen bonds: B:F.140, B:Q.178
ZEX.32: 20 residues within 4Å:- Chain B: F.41, P.43, F.46, H.62, V.65, A.66, A.69, V.73, Q.76, L.90, L.96, H.97, M.169, F.172
- Chain C: V.109
- Ligands: CLA.19, CLA.20, CLA.21, CLA.23, ZEX.34
11 PLIP interactions:10 interactions with chain B, 1 interactions with chain C- Hydrophobic interactions: B:F.41, B:P.43, B:V.65, B:A.66, B:V.73, B:M.169, B:F.172, B:F.172, B:F.172, C:V.109
- Hydrogen bonds: B:Q.76
ZEX.33: 15 residues within 4Å:- Chain A: P.173
- Chain B: K.61, V.65, L.68, D.82, F.83, Y.84, I.109, V.113, W.116, E.117
- Ligands: CLA.21, CLA.22, CLA.24, CLA.25
5 PLIP interactions:4 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:F.83, B:I.109, B:V.113, B:V.113
- Hydrogen bonds: A:P.173
ZEX.34: 16 residues within 4Å:- Chain B: Q.91, S.93, H.97, I.170, F.172, G.173, F.176, H.177
- Ligands: CLA.18, CLA.19, CLA.20, CLA.23, CLA.28, CLA.29, ZEX.32, ZEX.35
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:Q.91, B:I.170, B:F.172, B:F.172, B:F.176
- Hydrogen bonds: B:H.97
ZEX.35: 17 residues within 4Å:- Chain B: E.38, R.163, R.166, L.167, I.170, L.180
- Chain C: T.94, A.97, Q.98, F.102
- Ligands: CLA.18, CLA.19, CLA.26, CLA.28, CLA.29, ZEX.34, CLA.40
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain C- Hydrophobic interactions: B:R.166, B:I.170, B:L.180, C:A.97, C:F.102
ZEX.48: 16 residues within 4Å:- Chain C: M.60, L.61, F.63, V.64, F.131, D.132, P.133, N.154, L.157, A.158, A.161, A.164, L.165
- Ligands: CLA.43, CLA.45, CLA.46
14 PLIP interactions:14 interactions with chain C- Hydrophobic interactions: C:M.60, C:F.63, C:F.63, C:F.63, C:V.64, C:F.131, C:P.133, C:N.154, C:L.157, C:L.157, C:A.161, C:A.164, C:L.165
- Hydrogen bonds: C:F.131
ZEX.49: 20 residues within 4Å:- Chain C: F.34, P.36, L.37, M.38, I.39, H.55, I.58, A.62, T.66, L.84, A.87, L.96, M.159, M.162
- Ligands: CLA.37, CLA.38, CLA.39, CLA.41, ZEX.52, BCR.170
9 PLIP interactions:9 interactions with chain C- Hydrophobic interactions: C:F.34, C:P.36, C:I.39, C:I.58, C:T.66, C:L.96
- Hydrogen bonds: C:L.37, C:M.38, C:I.39
ZEX.50: 11 residues within 4Å:- Chain C: K.153, R.156, I.160, L.171
- Chain L: T.4
- Ligands: CLA.36, CLA.37, CLA.44, CLA.46, CLA.47, ZEX.52
4 PLIP interactions:3 interactions with chain C, 1 interactions with chain L- Hydrophobic interactions: C:I.160, C:I.160, L:T.4
- Hydrogen bonds: C:K.153
ZEX.51: 14 residues within 4Å:- Chain C: K.54, R.57, I.58, L.61, P.75, Y.77, I.99, T.103, F.106, Y.128
- Ligands: CLA.39, CLA.40, CLA.42, CLA.43
7 PLIP interactions:7 interactions with chain C- Hydrophobic interactions: C:R.57, C:I.58, C:L.61, C:P.75, C:I.99, C:F.106
- Hydrogen bonds: C:Y.128
ZEX.52: 15 residues within 4Å:- Chain C: V.85, H.88, M.159, I.160, M.162, L.163, W.166
- Ligands: CLA.36, CLA.37, CLA.38, CLA.41, CLA.46, ZEX.49, ZEX.50, 1DO.53
11 PLIP interactions:11 interactions with chain C- Hydrophobic interactions: C:V.85, C:I.160, C:I.160, C:I.160, C:M.162, C:L.163, C:L.163, C:L.163, C:W.166, C:W.166, C:W.166
- 1 x 1DO: 1-DODECANOL(Non-functional Binders)
1DO.53: 3 residues within 4Å:- Ligands: CLA.47, ZEX.52, BGC.106
No protein-ligand interaction detected (PLIP)- 1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
CL0.54: 21 residues within 4Å:- Chain D: F.449, I.534, T.538, Y.596, S.600, I.601, F.604, W.642, L.647, A.651, F.669, H.673, W.676, Y.728, G.732, T.735, T.736, F.739
- Ligands: CLA.108, CLA.110, CLA.111
22 PLIP interactions:22 interactions with chain D,- Hydrophobic interactions: D:F.449, D:I.534, D:I.534, D:T.538, D:Y.596, D:I.601, D:I.601, D:F.604, D:W.642, D:W.642, D:L.647, D:A.651, D:F.669, D:W.676, D:T.736, D:F.739
- Hydrogen bonds: D:Y.728
- pi-Stacking: D:H.673, D:H.673, D:W.676, D:W.676
- Metal complexes: D:H.673
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
PQN.93: 19 residues within 4Å:- Chain D: W.46, M.681, F.682, S.685, G.686, R.687, W.690, I.694, A.714, L.715, S.716, G.720
- Chain K: A.14, L.18
- Ligands: CLA.55, CLA.91, CLA.105, CLA.109, BCR.159
12 PLIP interactions:10 interactions with chain D, 2 interactions with chain K- Hydrophobic interactions: D:W.46, D:F.682, D:F.682, D:W.690, D:W.690, D:I.694, D:L.715, K:A.14, K:L.18
- Hydrogen bonds: D:S.685, D:L.715
- pi-Stacking: D:W.690
PQN.149: 17 residues within 4Å:- Chain E: I.21, W.22, M.660, F.661, S.664, W.665, R.666, W.669, A.697, L.698, A.703
- Ligands: CLA.84, CLA.92, CLA.146, CLA.147, BCR.155, BCR.176
13 PLIP interactions:13 interactions with chain E- Hydrophobic interactions: E:I.21, E:W.22, E:W.22, E:F.661, E:F.661, E:R.666, E:W.669, E:W.669, E:L.698, E:A.703
- Hydrogen bonds: E:L.698
- pi-Stacking: E:W.669, E:W.669
- 2 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.94: 26 residues within 4Å:- Chain D: W.46, N.47, H.49, A.50, D.51, F.396, R.568, W.585, L.592, S.716, T.718, Q.719, A.722, V.725, A.726, L.729, L.730
- Ligands: CLA.55, CLA.56, CLA.58, CLA.60, CLA.63, CLA.80, CLA.82, CLA.91, BCR.100
15 PLIP interactions:15 interactions with chain D- Hydrophobic interactions: D:W.46, D:H.49, D:F.396, D:L.592, D:Q.719, D:A.726, D:L.729, D:L.730
- Hydrogen bonds: D:D.51, D:R.568, D:R.568, D:S.716, D:T.718
- Salt bridges: D:R.568, D:R.568
LHG.95: 15 residues within 4Å:- Chain D: H.325, G.327, P.328, L.329, T.330, G.333, H.334, V.422
- Ligands: CLA.76, CLA.78, CLA.83, CLA.90, BCR.98, CLA.171, CLA.178
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:G.327, D:L.329, D:T.330, D:T.330, D:H.334
- 21 x BCR: BETA-CAROTENE(Non-covalent)
BCR.96: 15 residues within 4Å:- Chain D: F.81, Y.88, T.158, G.161, G.162, M.165, L.204, S.208
- Ligands: CLA.57, CLA.66, CLA.67, CLA.68, BCR.97, BCR.102, CLA.169
Ligand excluded by PLIPBCR.97: 12 residues within 4Å:- Chain D: W.83, L.84, G.200, L.204, G.205
- Ligands: CLA.57, CLA.58, CLA.65, CLA.66, CLA.71, CLA.81, BCR.96
Ligand excluded by PLIPBCR.98: 18 residues within 4Å:- Chain D: L.337, L.341, A.347, I.351, A.405, Y.408, L.423
- Chain O: V.130, A.134, I.137
- Ligands: CLA.73, CLA.76, CLA.77, CLA.86, CLA.90, LHG.95, BCR.99, CLA.178
Ligand excluded by PLIPBCR.99: 16 residues within 4Å:- Chain D: A.354, M.355, S.358, I.398, A.401, G.402, T.543, L.546, L.547
- Ligands: CLA.73, CLA.78, CLA.79, CLA.86, CLA.87, CLA.90, BCR.98
Ligand excluded by PLIPBCR.100: 23 residues within 4Å:- Chain D: M.668, G.671, A.672, F.674, V.675, L.730, I.733, A.734, W.737
- Chain E: F.429, L.432, V.436
- Ligands: CLA.60, CLA.80, CLA.82, CLA.91, LHG.94, CLA.107, CLA.110, CLA.139, CLA.140, BCR.159, BCR.165
Ligand excluded by PLIPBCR.102: 19 residues within 4Å:- Chain D: L.207, L.257, F.260, L.295, V.299, L.302, H.306, I.314
- Chain L: A.27, A.38, S.39, C.41, F.42
- Ligands: CLA.67, CLA.69, CLA.72, CLA.74, BCR.96, BCR.170
Ligand excluded by PLIPBCR.150: 9 residues within 4Å:- Chain E: L.186, L.220, I.283, V.284, H.287
- Ligands: CLA.123, CLA.124, CLA.128, CLA.129
Ligand excluded by PLIPBCR.151: 10 residues within 4Å:- Chain E: L.54, I.57, F.58, G.179, V.183
- Ligands: CLA.113, CLA.114, CLA.121, CLA.128, CLA.136
Ligand excluded by PLIPBCR.152: 9 residues within 4Å:- Chain E: L.65, W.121, W.122, G.136, L.140, L.143
- Ligands: CLA.122, CLA.123, CLA.136
Ligand excluded by PLIPBCR.153: 10 residues within 4Å:- Chain E: M.409, V.533
- Ligands: CLA.127, CLA.130, CLA.131, CLA.133, CLA.134, CLA.138, CLA.148, BCR.154
Ligand excluded by PLIPBCR.154: 18 residues within 4Å:- Chain E: F.330, G.333, L.334, A.337, V.341, I.381, A.384, F.385, G.388, F.392
- Ligands: CLA.127, CLA.131, CLA.133, CLA.134, CLA.141, CLA.142, CLA.145, BCR.153
Ligand excluded by PLIPBCR.155: 17 residues within 4Å:- Chain D: I.442, M.446
- Chain E: W.646, M.647, F.650, W.669, I.673, L.676
- Ligands: CLA.84, CLA.92, CLA.103, CLA.108, CLA.116, CLA.117, CLA.137, CLA.147, PQN.149
Ligand excluded by PLIPBCR.159: 17 residues within 4Å:- Chain D: I.694
- Chain E: L.425, F.429
- Chain I: L.113, F.114, I.117
- Chain K: L.25
- Ligands: CLA.91, PQN.93, BCR.100, CLA.105, CLA.107, CLA.109, CLA.139, CLA.140, CLA.160, 3XQ.167
Ligand excluded by PLIPBCR.162: 11 residues within 4Å:- Chain D: L.704
- Chain I: T.97, F.107, G.119, G.122, W.123, W.160
- Ligands: CLA.104, CLA.139, CLA.144, CLA.161
Ligand excluded by PLIPBCR.163: 15 residues within 4Å:- Chain J: V.14, G.15, L.18, P.19
- Ligands: CLA.84, CLA.85, CLA.103, CLA.108, CLA.115, CLA.116, CLA.117, CLA.118, CLA.146, CLA.147, BCR.172
Ligand excluded by PLIPBCR.165: 17 residues within 4Å:- Chain D: I.79
- Chain K: A.22, L.25, N.29
- Ligands: CLA.55, CLA.58, CLA.59, CLA.60, CLA.61, CLA.63, CLA.80, CLA.91, BCR.100, CLA.110, CLA.139, CLA.140, BCR.166
Ligand excluded by PLIPBCR.166: 19 residues within 4Å:- Chain D: W.115, I.117
- Chain K: Y.6, P.11, V.12, T.15, F.19, A.22, I.26, E.27, R.30
- Ligands: CLA.55, CLA.56, CLA.59, CLA.60, CLA.61, CLA.63, CLA.164, BCR.165
Ligand excluded by PLIPBCR.170: 15 residues within 4Å:- Chain C: P.36, L.37
- Chain D: V.299
- Chain L: I.37, C.41, H.44, I.45, V.48
- Ligands: CLA.36, CLA.37, ZEX.49, CLA.69, CLA.72, BCR.102, CLA.169
Ligand excluded by PLIPBCR.172: 14 residues within 4Å:- Chain E: L.685
- Chain M: F.62, S.81, L.85, I.88
- Ligands: CLA.84, CLA.85, CLA.89, CLA.92, CLA.118, CLA.146, BCR.163, CLA.171, CLA.174
Ligand excluded by PLIPBCR.176: 21 residues within 4Å:- Chain E: F.5, I.25, I.689
- Chain J: M.23, L.26, F.27
- Chain M: L.89, G.92, M.93, L.95, Y.96, F.121
- Ligands: CLA.84, CLA.92, CLA.112, CLA.117, CLA.146, CLA.147, PQN.149, DGD.156, CLA.174
Ligand excluded by PLIPBCR.177: 12 residues within 4Å:- Chain M: M.52, A.53, Y.56, L.123, G.124, G.127, G.128, F.131
- Ligands: CLA.85, CLA.173, CLA.174, CLA.175
Ligand excluded by PLIP- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
SF4.101: 10 residues within 4Å:- Chain D: C.571, G.573, C.580, I.717
- Chain E: C.557, G.559, P.560, T.565, C.566, I.700
1 PLIP interactions:1 interactions with chain E,- Metal complexes: E:C.557
SF4.157: 11 residues within 4Å:- Chain F: C.21, L.23, V.25, L.26, C.48, G.50, C.51, K.52, R.53, C.54, V.67
0 PLIP interactions:SF4.158: 13 residues within 4Å:- Chain F: C.11, I.12, G.13, C.14, T.15, Q.16, C.17, A.57, C.58, P.59, T.60, S.64, I.65
0 PLIP interactions:- 1 x BGC: beta-D-glucopyranose(Non-covalent)
BGC.106: 3 residues within 4Å:- Chain C: V.85
- Chain D: R.243
- Ligands: 1DO.53
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:R.243, D:R.243
- 1 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.156: 27 residues within 4Å:- Chain E: S.9, A.11, L.12, W.22, Y.23, I.25, A.26, T.27, S.33, S.554, W.571, F.574, V.701, Q.702, L.705, L.708, T.712, V.713, I.716
- Ligands: CLA.84, CLA.112, CLA.114, CLA.117, CLA.135, CLA.137, CLA.147, BCR.176
12 PLIP interactions:12 interactions with chain E- Hydrophobic interactions: E:A.26, E:F.574, E:Q.702, E:L.705, E:T.712, E:V.713, E:I.716
- Hydrogen bonds: E:S.9, E:D.30, E:D.30, E:S.554, E:S.554
- 1 x 3XQ: (2S)-2,3-dihydroxypropyl octadecanoate(Non-covalent)
3XQ.167: 16 residues within 4Å:- Chain E: H.430, L.434, I.453
- Chain I: K.81, E.106, F.107, P.110
- Chain K: F.32, S.35, L.36, F.37, Y.38
- Ligands: CLA.139, CLA.140, CLA.144, BCR.159
8 PLIP interactions:4 interactions with chain I, 3 interactions with chain E, 1 interactions with chain K- Hydrophobic interactions: I:F.107, I:P.110, I:P.110, E:H.430, E:L.434, E:I.453, K:Y.38
- Hydrogen bonds: I:K.81
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pi, X. et al., Unique organization of photosystem I-light-harvesting supercomplex revealed by cryo-EM from a red alga. Proc. Natl. Acad. Sci. U.S.A. (2018)
- Release Date
- 2018-04-11
- Peptides
- Lhcr1: A
Lhcr2: B
Lhcr3: C
PsaA: D
PsaB: E
PsaC: F
PsaD: G
PsaE: H
PsaF: I
PsaI: J
PsaJ: K
PsaK: L
PsaL: M
PsaM: N
PsaO: O - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
1B
2C
3D
AE
BF
CG
DH
EI
FJ
IK
JL
KM
LN
MO
O - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 133 x CLA: CHLOROPHYLL A(Non-covalent)
- 15 x ZEX: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol(Non-covalent)
- 1 x 1DO: 1-DODECANOL(Non-functional Binders)
- 1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
- 2 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
- 21 x BCR: BETA-CAROTENE(Non-covalent)
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 1 x BGC: beta-D-glucopyranose(Non-covalent)
- 1 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
- 1 x 3XQ: (2S)-2,3-dihydroxypropyl octadecanoate(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pi, X. et al., Unique organization of photosystem I-light-harvesting supercomplex revealed by cryo-EM from a red alga. Proc. Natl. Acad. Sci. U.S.A. (2018)
- Release Date
- 2018-04-11
- Peptides
- Lhcr1: A
Lhcr2: B
Lhcr3: C
PsaA: D
PsaB: E
PsaC: F
PsaD: G
PsaE: H
PsaF: I
PsaI: J
PsaJ: K
PsaK: L
PsaL: M
PsaM: N
PsaO: O - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
1B
2C
3D
AE
BF
CG
DH
EI
FJ
IK
JL
KM
LN
MO
O - Membrane
-
We predict this structure to be a membrane protein.