SMTL ID : 6ly5.1

Organization and energy transfer in a huge diatom PSI-FCPI supercomplex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-3-1-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
35 x DD6: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol(Non-covalent)(Covalent)
102 x A86: (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate(Non-covalent)(Covalent)(Non-functional Binders)
326 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
34 x KC1: Chlorophyll c1(Covalent)(Non-covalent)
2 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Covalent)(Non-covalent)
26 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)(Covalent)(Non-functional Binders)
3 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
22 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)(Non-functional Binders)(Covalent)
16 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)(Covalent)
2 x PQN: PHYLLOQUINONE(Non-covalent)
18 x BCR: BETA-CAROTENE(Non-covalent)
3 x SF4: IRON/SULFUR CLUSTER(Covalent)(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Xu, C. et al., Structural basis for energy transfer in a huge diatom PSI-FCPI supercomplex. Nat Commun (2020)
Release Date
2020-10-21
Peptides
FCPI-7: A
FCPI-1: B
FCPI-11: C
FCPI-6: D
FCPI-5: E
FCPI-8: F
FCPI-4: G
FCPI-10: H
FCPI-3: I
FCPI-9: J
FCPI-13: K
FCPI-14: L
FCPI-16: M
FCPI-21: N
FCPI: OPQ
FCPI-24: R
FCPI-23: S
FCPI-12: T
FCPI-17: UV
PsaA: W
PsaB: X
PsaC: Y
PsaD: Z
PsaE: 0
PsaF: 1
PsaI: 2
PsaJ: 3
PsaL: 4
PsaM: 5
PsaS: 6
PsaR: 7
FCPI-2: 8
FCPI-19: 9
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
N
N
O
O
P
P
Q
Q
R
R
S
S
T
T
U
W
V
X
W
a
X
b
Y
c
Z
d
0
e
1
f
2
i
3
j
4
l
5
m
6
g
7
h
8
U
9
V
Membrane
We predict this structure to be a membrane protein.

FCPI-7

FCPI-1

FCPI-11

FCPI-6

FCPI-5

FCPI-8

FCPI-4

FCPI-10

FCPI-3

FCPI-9

FCPI-13

FCPI-14

FCPI-16

FCPI-21

FCPI

Toggle Identical (OPQ)

FCPI-24

FCPI-23

FCPI-12

FCPI-17

PsaA

PsaB

PsaC

PsaD

PsaE

PsaF

PsaI

PsaJ

PsaL

PsaM

PsaS

PsaR

FCPI-2

FCPI-19

Related Entries With Identical Sequence

2o01.1 | 2wsc.1 | 2wse.1 | 2wsf.1 | 4rku.1 | 4xk8.1 | 4xk8.2 | 4y28.1 | 5gpn.62 | 5gpn.68 | 5l8r.1 | 5zgb.1 | 5zgh.1 | 6fos.1 | 6yac.1 | 6yez.1 | 6zoo.1 | 6zxs.1 | 7dkz.1