SMTL ID : 6ag9.1

Crystal structure of uPA in complex with 3,5-bis(azanyl)-6-(1-benzofuran-2-yl)-N-carbamimidoyl-pyrazine-2- carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

1 x 9XF: 3,5-bis(azanyl)-6-(1-benzofuran-2-yl)-N-carbamimidoyl-pyrazine-2-carboxamide(Non-covalent)

9XF.1: 13 residues within 4Å: Chain A: D.192, S.193, C.194, Q.195, S.198, V.216, S.217, W.218, G.219, G.221, C.222, G.229 Ligands: SO4.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:S.193, A:S.193, A:S.198, A:G.221 Water bridges: A:S.198, A:S.198, A:S.217, A:G.219, A:G.219, A:V.230 Salt bridges: A:D.192

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: C.31, H.46, Q.195, G.196, S.198 Ligands: 9XF.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.196, A:S.198, A:S.198 Water bridges: A:V.30, A:H.46 Salt bridges: A:H.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Buckley, B. et al., uPA-HMA. To Be Published

Release Date

2019-09-18

Peptides

Urokinase-type plasminogen activator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
U

Urokinase-type plasminogen activator

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