SMTL ID : 6ai8.1

Cab2 mutant-H337A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

7 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: P.56, A.57, T.190, N.192, Q.193 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.57, A:T.190, A:N.192 GOL.2: 6 residues within 4Å: Chain A: Y.58, E.130, P.187, F.188, T.189, Q.193 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.188, A:T.189 Water bridges: A:Q.193 GOL.3: 3 residues within 4Å: Chain A: K.287, R.305, Y.306 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.287, A:R.305, A:Y.306 GOL.4: 7 residues within 4Å: Chain A: E.47, F.50, K.199, K.203, R.272, S.276, W.277 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.199, A:K.199, A:K.203, A:K.203, A:R.272 GOL.6: 5 residues within 4Å: Chain B: P.56, A.57, T.190, N.192, Q.193 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:A.57, B:T.190, B:N.192, B:Q.193 GOL.7: 6 residues within 4Å: Chain A: F.131, S.141, H.142 Chain B: F.131, S.141, H.142 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:H.142 Water bridges: B:F.131, B:F.131, B:S.141, A:S.141 GOL.8: 4 residues within 4Å: Chain B: K.268, K.287, R.305, Y.306 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.268, B:K.268, B:R.305 Water bridges: B:A.302

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 6 residues within 4Å: Chain A: S.105, A.106, G.107, T.108, R.109, R.319 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:A.106, A:G.107, A:T.108, A:R.109 Water bridges: A:G.87, A:G.110 Salt bridges: A:R.319 SO4.9: 6 residues within 4Å: Chain B: S.105, A.106, G.107, T.108, R.109, R.319 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:S.105, B:A.106, B:G.107, B:T.108, B:T.108, B:T.108, B:R.109 Water bridges: B:G.87 Salt bridges: B:R.319

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, P. et al., Crystallographic Analysis of the Catalytic Mechanism of Phosphopantothenoylcysteine Synthetase from Saccharomyces cerevisiae. J. Mol. Biol. (2019)

Release Date

2019-03-20

Peptides

Phosphopantothenate--cysteine ligase CAB2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phosphopantothenate--cysteine ligase CAB2

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