SMTL ID : 6an1.1

Crystal structure of the complex between PPARgamma LBD and the ligand AM-879

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

homo-dimer

Ligands

1 x BKY: 4-({2-[(1,3-dioxo-1,3-dihydro-2H-inden-2-ylidene)methyl]phenoxy}methyl)benzoic acid(Non-covalent)

BKY.1: 11 residues within 4Å: Chain A: L.37, I.90, C.94, R.97, L.139, L.142, I.150, S.151, E.152, M.157, M.173 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:R.97, A:L.139, A:I.150 Hydrogen bonds: A:S.151 Salt bridges: A:R.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ribeiro Filho, H.V. et al., Screening for PPAR Non-Agonist Ligands Followed by Characterization of a Hit, AM-879, with Additional No-Adipogenic and cdk5-Mediated Phosphorylation Inhibition Properties. Front Endocrinol (Lausanne) (2018)

Release Date

2018-02-14

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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