SMTL ID : 6anh.1

Crystal structure of PPK2 class III in complex with Guanosine 5-tetraphosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

1 x BKP: 5'-O-[(S)-hydroxy{[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]guanosine(Non-covalent)

BKP.1: 17 residues within 4Å: Chain A: D.77, A.78, A.79, G.80, K.81, D.82, F.102, K.103, V.104, P.105, R.117, R.133, E.137, N.138, V.141, Y.148, R.208 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:D.77, A:A.78, A:A.79, A:G.80, A:K.81, A:D.82, A:R.117, A:N.138 Water bridges: A:G.83, A:G.83 Salt bridges: A:K.81, A:K.81, A:K.81, A:K.103, A:K.103, A:R.133, A:R.133, A:R.208, A:R.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Structural Insights into Substrate Selectivity and Activity of Bacterial Polyphosphate Kinases. Acs Catalysis (2018)

Release Date

2019-01-16

Peptides

Polyphosphate:AMP phosphotransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polyphosphate:AMP phosphotransferase

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