SMTL ID : 6apf.2 (1 other biounit)

Trans-acting transferase from Disorazole synthase complexed with Citrate.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 11 residues within 4Å: Chain A: Q.9, S.86, R.111, M.115, M.123, N.150, V.158, V.186, F.190, H.191 Ligands: GOL.4 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Q.9, A:S.86, A:N.150, A:H.191 Water bridges: A:L.87 Salt bridges: A:R.111, A:H.191, A:H.191

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: G.120, G.121, A.162, K.163 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.121, A:K.163 Water bridges: A:G.120, A:G.121, A:D.164 GOL.3: 1 residues within 4Å: Chain A: R.119 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.119 GOL.4: 6 residues within 4Å: Chain A: Q.9, G.10, Q.12, L.184, V.186 Ligands: CIT.1 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.9, A:G.10, A:Q.12, A:Q.12 Water bridges: A:Q.9, A:T.54, A:T.57

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 4 residues within 4Å: Chain A: M.16, G.17, L.20, H.266 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.17 Water bridges: A:G.15, A:G.265, A:G.265, A:G.267 Salt bridges: A:H.266

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mathews, I.I. et al., The Conformational Flexibility of the Acyltransferase from the Disorazole Polyketide Synthase Is Revealed by an X-ray Free-Electron Laser Using a Room-Temperature Sample Delivery Method for Serial Crystallography. Biochemistry (2017)

Release Date

2018-04-04

Peptides

DisD protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

DisD protein

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