SMTL ID : 6apg.1 (1 other biounit)

Trans-acting transferase from Disorazole synthase with malonate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x MLI: MALONATE ION(Non-functional Binders)

MLI.1: 8 residues within 4Å: Chain A: Q.9, H.85, S.86, R.111, M.115, M.123, N.150, H.191 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:Q.9, A:S.86, A:S.86, A:N.150 Water bridges: A:L.87, A:L.87 Salt bridges: A:H.85, A:R.111, A:H.191, A:H.191

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: G.120, G.121, A.162, K.163 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.121, A:K.163 Water bridges: A:D.164

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 5 residues within 4Å: Chain A: M.16, G.17, L.20, V.64, H.266 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.17 Water bridges: A:R.18, A:R.18, A:A.19, A:G.265, A:H.266, A:G.267 Salt bridges: A:H.266

1 x CA: CALCIUM ION(Non-covalent)

CA.4: 4 residues within 4Å: Chain A: E.207, Y.209, D.210, R.233 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.207, A:Y.209, A:D.210

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mathews, I.I. et al., The Conformational Flexibility of the Acyltransferase from the Disorazole Polyketide Synthase Is Revealed by an X-ray Free-Electron Laser Using a Room-Temperature Sample Delivery Method for Serial Crystallography. Biochemistry (2017)

Release Date

2018-04-04

Peptides

DisD protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DisD protein

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