SMTL ID : 6ba7.1

Crystal structure of Mycobacterium tuberculosis malate synthase in complex with 2-Cl-4-OH-phenyldiketoacid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: E.434, D.462 Ligands: D1Y.2 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.434, A:D.462, H2O.1, H2O.1 MG.3: 2 residues within 4Å: Chain A: N.234, H.235 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:H.235, H2O.2, H2O.4, H2O.4, H2O.5

1 x D1Y: (2Z)-4-(2-chloro-4-hydroxyphenyl)-2-hydroxy-4-oxobut-2-enoic acid(Non-covalent)

D1Y.2: 14 residues within 4Å: Chain A: V.118, R.339, M.432, E.434, G.459, F.460, L.461, D.462, M.515, W.541, M.631, D.633, A.635 Ligands: MG.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.461, A:W.541, A:D.633 Hydrogen bonds: A:R.339, A:R.339, A:L.461, A:D.462, A:M.631 Water bridges: A:D.274, A:E.434

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ellenbarger, J.F. et al., Anion-pi Interactions in Computer-Aided Drug Design: Modeling the Inhibition of Malate Synthase by Phenyl-Diketo Acids. J Chem Inf Model (2018)

Release Date

2018-09-05

Peptides

Malate synthase G: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Malate synthase G

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