SMTL ID : 6baq.1 (7 other biounits)

Mus musculus BPIFA1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

11 x NA: SODIUM ION(Non-functional Binders)

NA.1: 2 residues within 4Å: Chain A: T.171, H.172 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.172 Water bridges: A:Q.208 NA.2: 3 residues within 4Å: Chain A: T.35, D.36, F.240 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.35 NA.3: 1 residues within 4Å: Chain A: D.44 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.44 Water bridges: A:D.44 NA.4: 4 residues within 4Å: Chain A: N.95, M.134, P.135, V.136 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.95, A:M.134, A:V.136 NA.5: 2 residues within 4Å: Chain A: S.176, K.178 No protein-ligand interaction detected (PLIP) NA.6: 3 residues within 4Å: Chain A: P.31, S.32, P.34 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:P.31 NA.7: 4 residues within 4Å: Chain A: L.140, L.141, Q.142, L.182 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.140, A:Q.142 NA.8: 2 residues within 4Å: Chain A: E.60, I.101 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.101 NA.9: 3 residues within 4Å: Chain A: P.115, D.116, R.119 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.116, A:D.116, A:R.119 NA.10: 6 residues within 4Å: Chain A: T.35, D.36, L.37, L.38, A.39, F.240 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.38, A:A.39, A:F.240 Water bridges: A:G.40 NA.11: 1 residues within 4Å: Chain A: D.103 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.103, A:D.103, A:D.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Little, M.S. et al., Crystal structure of the mouse innate immunity factor bacterial permeability-increasing family member A1. Acta Crystallogr F Struct Biol Commun (2018)

Release Date

2018-05-09

Peptides

BPI fold-containing family A member 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BPI fold-containing family A member 1

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