SMTL ID : 6bci.1

Wild-type I-LtrI bound to non-cognate C4 substrate (pre-cleavage complex)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

monomer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: A.28, E.184, Q.211 Chain B: A.17 Chain C: C.15 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:A.28, A:E.184, H2O.1 CA.2: 5 residues within 4Å: Chain A: E.29, G.183 Chain B: T.16 Chain C: G.16 Ligands: CA.3 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.29, A:G.183, H2O.1, H2O.2 CA.3: 8 residues within 4Å: Chain A: E.29, G.183, E.184 Chain B: T.16, A.17 Chain C: C.15, G.16 Ligands: CA.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.29, A:E.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McMurrough, T.A. et al., Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases. Nucleic Acids Res. (2018)

Release Date

2018-10-24

Peptides

Ribosomal protein 3/homing endonuclease-like fusion protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosomal protein 3/homing endonuclease-like fusion protein

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