SMTL ID : 6bn8.1

Crystal structure of DDB1-CRBN-BRD4(BD1) complex bound to dBET55 PROTAC.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.99 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain B: C.344, C.347, C.412, C.415 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.344, B:C.347, B:C.412, B:C.415

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nowak, R.P. et al., Plasticity in binding confers selectivity in ligand-induced protein degradation. Nat. Chem. Biol. (2018)

Release Date

2018-06-06

Peptides

DNA damage-binding protein 1,DNA damage-binding protein 1: A
Protein cereblon: B
Bromodomain-containing protein 4: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

DNA damage-binding protein 1,DNA damage-binding protein 1

Protein cereblon

Bromodomain-containing protein 4

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