SMTL ID : 6c56.1

Crystal structure of mutant human geranylgeranyl pyrophosphate synthase (Y246D) in its Apo form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

1 x VT0: {[(2-phenylthieno[2,3-d]pyrimidin-4-yl)amino]methylene}bis(phosphonic acid)(Non-covalent)

VT0.1: 8 residues within 4Å: Chain B: D.129, H.130, P.131, L.187, F.188, S.189, D.190, K.192 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.192 Water bridges: B:L.187, B:D.190 pi-Stacking: B:H.130, B:F.188

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lacbay, C.M. et al., Unraveling the Prenylation-Cancer Paradox in Multiple Myeloma with Novel Geranylgeranyl Pyrophosphate Synthase (GGPPS) Inhibitors. J. Med. Chem. (2018)

Release Date

2018-09-05

Peptides

Geranylgeranyl pyrophosphate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Geranylgeranyl pyrophosphate synthase

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